myRT

myRT report for GCA_900546625.1_UMGS904

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Seq: URDU01000001.1 uncultured Lachnobacterium sp. isolate UMGS904 genome assembly, contig: NODE_2_length_270990_cov_7.168904, whole genome shotgun sequence (270990 bp)
Overview 1 RT 1: 265235-268947 bp Neighborhood of RT #1 [265235, 268985] RVT-UG2 DUF4238 Feature: gene Location: 265235-265372 bp Feature: gene Location: 265421-265735 bp Feature: gene Location: 266066-267388 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 266303-267116 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 266303-2671 1 6 bp Feature: gene Location: 267411-267662 bp Feature: gene Location: 267864-268985 bp Feature: domain Description: DUF4238 Location: 267912-268947 bp Feature: domain Description: DUF4238 Location: 26791 2-268947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, DUF4238 (pfam14022)

Seq: URDU01000020.1 uncultured Lachnobacterium sp. isolate UMGS904 genome assembly, contig: NODE_151_length_50023_cov_8.263188, whole genome shotgun sequence (50023 bp)
Overview 1 RT 1: 35044-38859 bp Neighborhood of RT #1 [35044, 38859] RVT-DGRs Avd_like Feature: gene Location: 35044-35427 bp Feature: gene Location: 35443-35754 bp Feature: gene Location: 35744-36958 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35954-36617 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35954-36617 bp Feature: gene Location: 37317-37727 bp Feature: domain Description: Avd_like Location: 37377-37701 bp Feature: domain Description: Avd_like Location: 37377-37701 bp Feature: gene Location: 37813-38859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: URDU01000022.1 uncultured Lachnobacterium sp. isolate UMGS904 genome assembly, contig: NODE_180_length_44938_cov_8.095827, whole genome shotgun sequence (44938 bp)
Overview 1 RT 1: 17306-22437 bp Neighborhood of RT #1 [17306, 22442] DRE_TIM_HOA_like GT_MraY RVT-GII GIIM PurR Feature: gene Location: 17306-18292 bp Feature: domain Description: DRE_TIM_HOA_like Location: 17369-18158 bp Feature: domain Description: DRE_TIM_HOA_like Location: 173 69-18158 bp Feature: gene Location: 18485-19447 bp Feature: domain Description: GT_MraY Location: 18638-19433 bp Feature: domain Description: GT_MraY Location: 1863 8-1943 3 bp Feature: gene Location: 19557-20849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19758-20376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19758-203 76 bp Feature: domain Description: GIIM Note: maturase Location: 20430-20640 bp Feature: domain Description: GIIM Note: maturase Location: 2043 0-20640 bp Feature: gene Location: 20957-21097 bp Feature: gene Location: 21402-22442 bp Feature: domain Description: PurR Location: 21465-22437 bp Feature: domain Description: PurR Location: 21465-2243 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DRE_TIM_HOA_like (cd07944), GT_MraY (cd06852), RVT-GII, GIIM (pfam08388), PurR (COG1609)