myRT

myRT report for GCA_900548055.1_UMGS1053

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Seq: URJH01000026.1 uncultured Roseburia sp. isolate UMGS1053 genome assembly, contig: NODE_1110_length_39951_cov_9.664127, whole genome shotgun sequence (39951 bp)
Overview 1 RT 1: 630-5692 bp Neighborhood of RT #1 [630, 5829] Lant_dehydr_N RVT-CRISPR COG4951 Cas2_I_II_III Cas_Cas1 Feature: gene Location: 630-1286 bp Feature: domain Description: Lant_dehydr_N Location: 762-1077 bp Feature: domain Description: Lant_dehydr_N Location: 762-1 077 bp Feature: gene Location: 1296-1463 bp Feature: gene Location: 1732-4551 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1939-2542 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 939-2542 bp Feature: domain Description: COG4951 Location: 3124-3835 bp Feature: domain Description: COG4951 Location: 31 24-3835 bp Feature: gene Location: 4566-4856 bp Feature: domain Description: Cas2_I_II_III Location: 4572-4806 bp Feature: domain Description: Cas2_I_II_III Location: 4572-4806 bp Feature: gene Location: 4837-5829 bp Feature: domain Description: Cas_Cas1 Location: 4849-5692 bp Feature: domain Description: Cas_Cas1 Location: 4849-5692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lant_dehydr_N (pfam04738), RVT-CRISPR, COG4951 (Uncharacterized protein ), Cas2_I_II_III (cl11442), Cas_Cas1 (pfam01867)