myRT

myRT report for GCA_900548175.1_UMGS1064

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Seq: URJW01000160.1 uncultured Parabacteroides sp. isolate UMGS1064 genome assembly, contig: NODE_1034_length_7100_cov_4.26544, whole genome shotgun sequence (7100 bp)
Overview 1 RT 1: 50-5021 bp Neighborhood of RT #1 [50, 5021] RVT-DGRs Feature: gene Location: 50-805 bp Feature: gene Location: 792-2258 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1095-1722 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 095-1 722 bp Feature: gene Location: 2487-4562 bp Feature: gene Location: 4731-5021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: URJW01000208.1 uncultured Parabacteroides sp. isolate UMGS1064 genome assembly, contig: NODE_1451_length_5263_cov_3.34869, whole genome shotgun sequence (5263 bp)
Overview 1 RT 1: 3-4613 bp Neighborhood of RT #1 [3, 4663] HTH_XRE PAP2_like_2 RVT-GII GIIM COG1373 Feature: gene Location: 3-593 bp Feature: domain Description: HTH_XRE Location: 27-195 bp Feature: domain Description: HTH_XRE Location: 2 7-195 bp Feature: gene Location: 607-1263 bp Feature: domain Description: PAP2_like_2 Location: 757-1240 bp Feature: domain Description: PAP2 _like_2 Location: 757-12 40 bp Feature: gene Location: 1519-2817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1774-2467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1774-2 467 bp Feature: domain Description: GIIM Note: maturase Location: 2527-2746 bp Feature: domain Description: GIIM Note: maturase Location: 2 52 7-2 746 bp Feature: gene Location: 2868-3041 bp Feature: gene Location: 3317-4663 bp Feature: domain Description: COG1373 Location: 3338-4613 bp Feature: domain Description: COG1373 Location: 3338-4613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG1373 (Predicted ATPase, AAA+ superfamily ), HTH_XRE (smart00530), PAP2_like_2 (cd03392)