myRT

myRT report for GCA_900548465.1_UMGS1096

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Seq: URKY01000011.1 uncultured Eubacterium sp. isolate UMGS1096 genome assembly, contig: NODE_463_length_60178_cov_6.687840, whole genome shotgun sequence (60178 bp)
Overview 1 RT 1: 220-4014 bp Neighborhood of RT #1 [220, 4019] PerM RVT-GII UPF0236 ECM27 Feature: gene Location: 220-612 bp Feature: domain Description: PerM Location: 226-571 bp Feature: domain Description: PerM Location: 226-571 bp Feature: gene Location: 700-1029 bp Feature: gene Location: 1314-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1350-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 350-1 437 bp Feature: gene Location: 1554-2672 bp Feature: domain Description: UPF0236 Location: 1563-2619 bp Feature: domain Description: UPF0236 Location: 1 563-261 9 bp Feature: gene Location: 3018-4019 bp Feature: domain Description: ECM27 Location: 3057-4014 bp Feature: domain Description: ECM27 Location: 3057-401 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PerM (COG0628), RVT-GII, UPF0236 (pfam06782), ECM27 (COG0530)

Seq: URKY01000021.1 uncultured Eubacterium sp. isolate UMGS1096 genome assembly, contig: NODE_827_length_41532_cov_6.330617, whole genome shotgun sequence (41532 bp)
Overview 1 RT 1: 12187-18238 bp Neighborhood of RT #1 [12187, 18303] VirD4 RVT-GII KOG4768 VirD4 DUF3801 Feature: gene Location: 12187-12504 bp Feature: gene Location: 12510-14135 bp Feature: domain Description: VirD4 Location: 12519-13635 bp Feature: domain Description: VirD4 Location: 12 519-13635 bp Feature: gene Location: 14272-16053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14530-15232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14530-152 32 bp Feature: domain Description: KOG4768 Location: 15352-15466 bp Feature: domain Description: KOG4768 Location: 15352 -15466 bp Feature: gene Location: 16781-17344 bp Feature: domain Description: VirD4 Location: 16937-17300 bp Feature: domain Description: VirD4 Location: 16937-17300 bp Feature: gene Location: 17347-18303 bp Feature: domain Description: DUF3801 Location: 17446-18238 bp Feature: domain Description: DUF3801 Location: 17446-182 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), DUF3801 (pfam12687)

Seq: URKY01000033.1 uncultured Eubacterium sp. isolate UMGS1096 genome assembly, contig: NODE_1387_length_28378_cov_5.496240, whole genome shotgun sequence (28378 bp)
Overview 1 RT 1: 8655-18874 bp Neighborhood of RT #1 [8655, 18885] DUF1566 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 8655-10484 bp Feature: gene Location: 10547-10900 bp Feature: gene Location: 10891-12312 bp Feature: domain Description: DUF1566 Location: 10963-11107 bp Feature: domain Description: DUF1566 Location: 10963 -11107 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11296-12037 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11296-1203 7 bp Feature: gene Location: 12325-12726 bp Feature: domain Description: Avd_like Location: 12364-12703 bp Feature: domain Description: Avd_like Location: 123 64-12703 bp Feature: gene Location: 12856-18885 bp Feature: domain Description: DUF1566 Location: 18568-18874 bp Feature: domain Description: DUF1566 Location: 18568-18874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)

Seq: URKY01000061.1 uncultured Eubacterium sp. isolate UMGS1096 genome assembly, contig: NODE_3996_length_11479_cov_5.565651, whole genome shotgun sequence (11479 bp)
Overview 1 RT 1: 6851-11477 bp Neighborhood of RT #1 [6851, 11477] RVT-UG27 Feature: gene Location: 6851-7840 bp Feature: gene Location: 7875-8333 bp Feature: gene Location: 9357-10625 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 9546-10182 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 954 6-10182 bp Feature: gene Location: 10622-10852 bp Feature: gene Location: 10935-11477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27