myRT

myRT report for GCA_900548655.1_UMGS1107

Download annotations/find similar RTs

Seq: URLE01000001.1 uncultured bacterium isolate UMGS1107 genome assembly, contig: NODE_3_length_313163_cov_54.0189, whole genome shotgun sequence (313163 bp)
Overview 1 RT 1: 452-3156 bp Neighborhood of RT #1 [452, 3167] Avd_like RVT-DGRs glyox_I Feature: gene Location: 452-823 bp Feature: domain Description: Avd_like Location: 479-779 bp Feature: domain Description: Avd_like Location: 479-779 bp Feature: gene Location: 946-1119 bp Feature: gene Location: 1128-2252 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1314-2001 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 31 4-2001 bp Feature: gene Location: 2475-2669 bp Feature: gene Location: 2784-3167 bp Feature: domain Description: glyox_I Location: 2790-3156 bp Feature: domain Description: glyox_I Location: 2790-31 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, glyox_I (TIGR00068)

Seq: URLE01000002.1 uncultured bacterium isolate UMGS1107 genome assembly, contig: NODE_4_length_257780_cov_49.0825, whole genome shotgun sequence (257780 bp)
Overview 1 RT 1: 251880-256081 bp Neighborhood of RT #1 [251880, 257037] UlaG HxlR RVT-UG3 RVT-UG8 Feature: gene Location: 251880-252659 bp Feature: domain Description: UlaG Location: 251883-252645 bp Feature: domain Description: UlaG Location: 2 51883-2 52 645 bp Feature: gene Location: 252781-253134 bp Feature: domain Description: HxlR Location: 252784-253114 bp Feature: domain Description: HxlR Location: 2 52 784-2 53114 bp Feature: gene Location: 253785-255011 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 254085-254538 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 54085-2 54538 bp Feature: gene Location: 255004-257037 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 255640-256081 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 55640-2 56081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UlaG (COG2220), HxlR (pfam01638), RVT-UG3, RVT-UG8