myRT

myRT report for GCA_900549055.1_UMGS1148

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Seq: URNB01000025.1 uncultured Ruminococcaceae bacterium isolate UMGS1148 genome assembly, contig: NODE_1560_length_22097_cov_4.987977, whole genome shotgun sequence (22097 bp)
Overview 1 RT 1: 8304-15310 bp Neighborhood of RT #1 [8304, 15310] SbcC SbcC dnaG DUF3854 RVT-GII HNHc Feature: gene Location: 8304-10109 bp Feature: domain Description: SbcC Location: 8355-8592 bp Feature: domain Description: SbcC Location: 8355-8592 bp Feature: domain Description: SbcC Location: 8865-9759 bp Feature: domain Description: SbcC Location: 8865-9759 bp Feature: gene Location: 10110-11255 bp Feature: domain Description: dnaG Location: 10203-10815 bp Feature: domain Description: dnaG Location: 1 0203-1 081 5 bp Feature: domain Description: DUF3854 Location: 10911-11205 bp Feature: domain Description: DUF3854 Location: 1 091 1 -1 1 205 bp Feature: gene Location: 11905-13833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12247-12982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2247-1 2982 bp Feature: domain Description: HNHc Note: nucleases Location: 13582-13720 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3582-1 3720 bp Feature: gene Location: 14234-14455 bp Feature: gene Location: 14483-15310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), DUF3854 (pfam12965), RVT-GII, HNHc (smart00507), SbcC (COG0419)