myRT

myRT report for GCA_900549145.1_UMGS1162

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Seq: URNO01000065.1 uncultured Prevotella sp. isolate UMGS1162 genome assembly, contig: NODE_181_length_13122_cov_3.80378, whole genome shotgun sequence (13122 bp)
Overview 1 RT 1: 1105-5791 bp Neighborhood of RT #1 [1105, 5796] RVT-Retrons Dcm Feature: gene Location: 1105-1944 bp Feature: gene Location: 1898-2245 bp Feature: gene Location: 2494-3528 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2722-3259 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2722-3259 bp Feature: gene Location: 3695-4135 bp Feature: gene Location: 4474-5796 bp Feature: domain Description: Dcm Location: 4561-5791 bp Feature: domain Description: Dcm Location: 4561 -5791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Dcm (COG0270)

Seq: URNO01000286.1 uncultured Prevotella sp. isolate UMGS1162 genome assembly, contig: NODE_1327_length_2784_cov_4.05203, whole genome shotgun sequence (2784 bp)
Overview 1 RT 1: 3-2747 bp Neighborhood of RT #1 [3, 2767] HD_3 RVT-GII RVT-GII STKc_PknB_like Feature: gene Location: 3-293 bp Feature: domain Description: HD_3 Location: 21-270 bp Feature: domain Description: HD_3 Location: 2 1-2 70 bp Feature: gene Location: 513-1304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 516-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 516-948 bp Feature: gene Location: 1324-1812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1579-1807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1579-1807 bp Feature: gene Location: 1931-2104 bp Feature: gene Location: 2282-2767 bp Feature: domain Description: STKc_PknB_like Location: 2309-2747 bp Feature: domain Description: STKc_PknB_like Location: 2 309-2 747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HD_3 (pfam13023), STKc_PknB_like (cd14014)

Seq: URNO01000304.1 uncultured Prevotella sp. isolate UMGS1162 genome assembly, contig: NODE_1506_length_2498_cov_4.14572, whole genome shotgun sequence (2498 bp)
Overview 1 RT 1: 17-1820 bp Neighborhood of RT #1 [17, 2497] RVT-Retrons Feature: gene Location: 17-448 bp Feature: gene Location: 445-1347 bp Feature: gene Location: 1352-2497 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1355-1820 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 55-1820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons