myRT

myRT report for GCA_900549295.1_UMGS1167

Download annotations/find similar RTs

Seq: URNG01000054.1 uncultured Rhodocyclaceae bacterium isolate UMGS1167 genome assembly, contig: NODE_966_length_19774_cov_34.057508, whole genome shotgun sequence (19774 bp)
Overview 1 RT 1: 7338-14251 bp Neighborhood of RT #1 [7338, 14364] InsE DUF1883 TIR_2 RVT-UG1 PRK09692 Feature: gene Location: 7338-7571 bp Feature: domain Description: InsE Location: 7365-7518 bp Feature: domain Description: InsE Location: 7365-751 8 bp Feature: gene Location: 7907-8674 bp Feature: domain Description: DUF1883 Location: 7910-8168 bp Feature: domain Description: DUF1 883 Location: 791 0-81 68 bp Feature: domain Description: TIR_2 Location: 8273-8579 bp Feature: domain Description: TIR_2 Location: 8273-8579 bp Feature: gene Location: 8845-12600 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 9490-9979 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 9490-9979 bp Feature: gene Location: 12737-12949 bp Feature: gene Location: 13012-14364 bp Feature: domain Description: PRK09692 Location: 13021-14251 bp Feature: domain Description: PRK09692 Location: 1 3021 -1 4251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), DUF1883 (pfam08980), TIR_2 (pfam13676), RVT-UG1, PRK09692 (Integrase; provisional)