myRT

myRT report for GCA_900549835.1_UMGS1234

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Seq: URPZ01000015.1 uncultured Clostridiales bacterium isolate UMGS1234 genome assembly, contig: NODE_194_length_39612_cov_14.758475, whole genome shotgun sequence (39612 bp)
Overview 1 RT 1: 11482-15251 bp Neighborhood of RT #1 [11482, 16294] ChiA1_BD ChiA1_BD RVT-DGRs CarboxypepD_reg CarboxypepD_reg Feature: gene Location: 11482-11664 bp Feature: gene Location: 11661-12305 bp Feature: domain Description: ChiA1_BD Location: 12009-12138 bp Feature: domain Description: ChiA1 _BD Location: 1 2009-1 21 38 bp Feature: domain Description: ChiA1_BD Location: 12195-12273 bp Feature: domain Description: ChiA1 _BD Location: 1 21 95-1 2273 bp Feature: gene Location: 12266-13369 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12485-13145 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 2485-1 31 45 bp Feature: gene Location: 13435-13722 bp Feature: gene Location: 13832-16294 bp Feature: domain Description: CarboxypepD_reg Location: 14852-15026 bp Feature: domain Description: CarboxypepD_reg Location: 1 4852-1 5026 bp Feature: domain Description: CarboxypepD_reg Location: 15071-15251 bp Feature: domain Description: CarboxypepD_reg Location: 1 5071 -1 5251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ChiA1_BD (cd12214), RVT-DGRs, CarboxypepD_reg (pfam13620)

Seq: URPZ01000025.1 uncultured Clostridiales bacterium isolate UMGS1234 genome assembly, contig: NODE_287_length_31033_cov_10.565466, whole genome shotgun sequence (31033 bp)
Overview 1 RT 1: 27700-31030 bp Neighborhood of RT #1 [27700, 31030] RVT-DGRs Feature: gene Location: 27700-27840 bp Feature: gene Location: 27844-28266 bp Feature: gene Location: 28208-29305 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28415-29072 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 8415-2 9072 bp Feature: gene Location: 29387-29590 bp Feature: gene Location: 29792-31030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: URPZ01000175.1 uncultured Clostridiales bacterium isolate UMGS1234 genome assembly, contig: NODE_4348_length_3143_cov_9.418070, whole genome shotgun sequence (3143 bp)
Overview 1 RT 1: 59-3134 bp Neighborhood of RT #1 [59, 3142] Doc PhdYeFM_antitox RVT-Retrons Cys_rich_CPCC DSP PAD_porph Feature: gene Location: 59-436 bp Feature: domain Description: Doc Location: 65-428 bp Feature: domain Description: Doc Location: 65-428 bp Feature: gene Location: 433-675 bp Feature: domain Description: PhdYeFM_antitox Location: 454-574 bp Feature: domain Description: PhdYeFM_antitox Location: 454-574 bp Feature: gene Location: 827-1891 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1055-1610 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1055-1610 bp Feature: gene Location: 2152-2847 bp Feature: domain Description: Cys_rich_CPCC Location: 2218-2383 bp Feature: domain Description: Cys_rich_CPCC Location: 2218-23 83 bp Feature: domain Description: DSP Location: 2596-2737 bp Feature: domain Description: DSP Location: 2596-273 7 bp Feature: gene Location: 2840-3142 bp Feature: domain Description: PAD_porph Location: 2945-3134 bp Feature: domain Description: PAD_porph Location: 2945-3 13 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cys_rich_CPCC (pfam14206), DSP (cd14498), PAD_porph (pfam04371), PhdYeFM_antitox (pfam02604), Doc (COG3654), RVT-Retrons

Seq: URPZ01000195.1 uncultured Clostridiales bacterium isolate UMGS1234 genome assembly, contig: NODE_6656_length_2131_cov_5.774566, whole genome shotgun sequence (2131 bp)
Overview 1 RT 1: 99-2083 bp Neighborhood of RT #1 [99, 2130] TraC-F-type RVT-GII Feature: gene Location: 99-1088 bp Feature: domain Description: TraC-F-type Location: 285-1050 bp Feature: domain Description: TraC-F-type Location: 285-1050 bp Feature: gene Location: 1582-2130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849-2083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184 9-2083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TraC-F-type (TIGR02746)