myRT

myRT report for GCA_900549875.1_UMGS1233

Download annotations/find similar RTs

Seq: URPY01000001.1 uncultured Anaerofustis sp. isolate UMGS1233 genome assembly, contig: NODE_3_length_480233_cov_5.108199, whole genome shotgun sequence (480233 bp)
Overview 1 RT 1: 237838-243664 bp Neighborhood of RT #1 [237838, 243672] MetK PRK14484 RVT-Retrons dha_L_ycgS PRK14481 Feature: gene Location: 237838-239001 bp Feature: domain Description: MetK Location: 237847-238996 bp Feature: domain Description: MetK Location: 237847-238996 bp Feature: gene Location: 239601-239978 bp Feature: domain Description: PRK14484 Location: 239604-239961 bp Feature: domain Description: PRK1 4484 Location: 239604-239961 bp Feature: gene Location: 240316-242016 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 240442-241045 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 240442-241 045 bp Feature: gene Location: 242055-242669 bp Feature: domain Description: dha_L_ycgS Location: 242079-242655 bp Feature: domain Description: dha_L_ycgS Location: 242079-242655 bp Feature: gene Location: 242680-243672 bp Feature: domain Description: PRK14481 Location: 242683-243664 bp Feature: domain Description: PRK1 4481 Location: 242683-243664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MetK (COG0192), PRK14484 (phosphotransferase mannnose-specific family component IIA; Provisional), RVT-Retrons, dha_L_ycgS (TIGR02365), PRK14481 (dihydroxyacetone kinase subunit DhaK; Provisional)

Seq: URPY01000016.1 uncultured Anaerofustis sp. isolate UMGS1233 genome assembly, contig: NODE_633_length_37574_cov_4.199792, whole genome shotgun sequence (37574 bp)
Overview 1 RT 1: 3-6205 bp Neighborhood of RT #1 [3, 6213] RMtype1_S_Cbo7060ORF11580P_TRD2-CR2_like RVT-UNC hsdR HsdR COG3587 Feature: gene Location: 3-269 bp Feature: domain Description: RMtype1_S_Cbo7060ORF11580P_TRD2-CR2_like Location: 63-267 bp Feature: domain Description: RMtype1_S_Cbo7060ORF11580P_TRD2 -CR2 _like Location: 63-2 67 bp Feature: gene Location: 450-2048 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 870-1362 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 870-1362 bp Feature: gene Location: 2420-5713 bp Feature: domain Description: hsdR Location: 2426-2933 bp Feature: domain Description: hsdR Location: 2 42 6-2 933 bp Feature: domain Description: HsdR Location: 2972-5630 bp Feature: domain Description: HsdR Location: 2 972 -5630 bp Feature: gene Location: 5974-6213 bp Feature: domain Description: COG3587 Location: 6037-6205 bp Feature: domain Description: COG3587 Location: 6037-62 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_Cbo7060ORF11580P_TRD2-CR2_like (cd17284), RVT-AbiK/RVT-UG12/RVT-UG15/RVT-UG8(RVT-UNC), hsdR (TIGR00348), HsdR (COG4096), COG3587 (Restriction endonuclease )