myRT

myRT report for GCA_900550185.1_UMGS1278

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Seq: URRN01000002.1 uncultured Collinsella sp. isolate UMGS1278 genome assembly, contig: NODE_153_length_53396_cov_8.141823, whole genome shotgun sequence (53396 bp)
Overview 1 RT 1: 44237-47912 bp Neighborhood of RT #1 [44237, 47980] Avd_like RVT-DGRs Phage_XkdX Phage_holin_4_1 Feature: gene Location: 44237-45481 bp Feature: gene Location: 45539-45949 bp Feature: domain Description: Avd_like Location: 45584-45920 bp Feature: domain Description: Avd_like Location: 45584-45920 bp Feature: gene Location: 45921-47309 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 46434-47037 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 46434-47037 bp Feature: gene Location: 47420-47569 bp Feature: domain Description: Phage_XkdX Location: 47441-47537 bp Feature: domain Description: Phage_XkdX Location: 47441 -47537 bp Feature: gene Location: 47615-47980 bp Feature: domain Description: Phage_holin_4_1 Location: 47645-47912 bp Feature: domain Description: Phage_holin_4_1 Location: 47645-4791 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phage_XkdX (pfam09693), Phage_holin_4_1 (pfam05105)

Seq: URRN01000169.1 uncultured Collinsella sp. isolate UMGS1278 genome assembly, contig: NODE_3615_length_4080_cov_6.708323, whole genome shotgun sequence (4080 bp)
Overview 1 RT 1: 2-2489 bp Neighborhood of RT #1 [2, 2509] RVT-DGRs EzrA Feature: gene Location: 2-139 bp Feature: gene Location: 332-1549 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 608-1208 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 608-12 08 bp Feature: gene Location: 1688-2014 bp Feature: gene Location: 2198-2509 bp Feature: domain Description: EzrA Location: 2297-2489 bp Feature: domain Description: EzrA Location: 2 2 97-2 489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, EzrA (pfam06160)