myRT

myRT report for GCA_900550215.1_UMGS1272

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Seq: URRD01000068.1 uncultured bacterium isolate UMGS1272 genome assembly, contig: NODE_1291_length_28151_cov_8.566486, whole genome shotgun sequence (28151 bp)
Overview 1 RT 1: 23071-27766 bp Neighborhood of RT #1 [23071, 27777] smpB Phage_holin_3_3 RVT-Retrons FAD_oxidored PocR GlxA Feature: gene Location: 23071-23532 bp Feature: domain Description: smpB Location: 23101-23527 bp Feature: domain Description: smpB Location: 231 01 -23527 bp Feature: gene Location: 23591-24022 bp Feature: domain Description: Phage_holin_3_3 Location: 23621-23828 bp Feature: domain Description: Phage_holin_3_3 Location: 23621 -23828 bp Feature: gene Location: 24448-25413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24586-25147 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24586-251 47 bp Feature: gene Location: 25489-26835 bp Feature: domain Description: FAD_oxidored Location: 25543-26809 bp Feature: domain Description: FAD_oxidored Location: 25543-26809 bp Feature: gene Location: 26956-27777 bp Feature: domain Description: PocR Location: 26962-27301 bp Feature: domain Description: PocR Location: 26962-27301 bp Feature: domain Description: GlxA Location: 27382-27766 bp Feature: domain Description: GlxA Location: 27382-27766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT smpB (TIGR00086), Phage_holin_3_3 (pfam16083), RVT-Retrons, FAD_oxidored (pfam12831), PocR (pfam10114), GlxA (COG4977)