myRT

myRT report for GCA_900550305.1_UMGS1284

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Seq: URRS01000001.1 uncultured bacterium isolate UMGS1284 genome assembly, contig: NODE_8_length_237085_cov_5.347167, whole genome shotgun sequence (237085 bp)
Overview 1 RT 1: 136756-141954 bp Neighborhood of RT #1 [136756, 141980] ADPRase_NUDT5 Cof RVT-DGRs PulG RBFA Feature: gene Location: 136756-137283 bp Feature: domain Description: ADPRase_NUDT5 Location: 136879-137272 bp Feature: domain Description: ADPRase_NUDT5 Location: 1 36879-1 37272 bp Feature: gene Location: 137276-138070 bp Feature: domain Description: Cof Location: 137279-138065 bp Feature: domain Description: Cof Location: 1 37279-1 38065 bp Feature: gene Location: 138498-140933 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 138693-139377 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 38693-1 39377 bp Feature: domain Description: PulG Location: 139872-140061 bp Feature: domain Description: PulG Location: 1 39872-1 40061 bp Feature: gene Location: 141217-141639 bp Feature: gene Location: 141636-141980 bp Feature: domain Description: RBFA Location: 141648-141954 bp Feature: domain Description: RBFA Location: 1 41 648-1 41 954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ADPRase_NUDT5 (cd03424), Cof (COG0561), RVT-DGRs, PulG (pfam11773), RBFA (pfam02033)

Seq: URRS01000002.1 uncultured bacterium isolate UMGS1284 genome assembly, contig: NODE_12_length_190838_cov_4.993936, whole genome shotgun sequence (190838 bp)
Overview 1 RT 1: 127555-132726 bp Neighborhood of RT #1 [127555, 132726] DUF2075 FtsZ_type1 RVT-Retrons DnaB Feature: gene Location: 127555-129543 bp Feature: domain Description: DUF2075 Location: 128251-129454 bp Feature: domain Description: DUF2 075 Location: 12 82 51-12 9454 bp Feature: gene Location: 129816-130412 bp Feature: domain Description: FtsZ_type1 Location: 129831-130380 bp Feature: domain Description: FtsZ_type1 Location: 12 9831-130380 bp Feature: gene Location: 130640-131527 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 130712-131228 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 130712 -1312 2 8 bp Feature: gene Location: 131530-132375 bp Feature: domain Description: DnaB Location: 131596-132340 bp Feature: domain Description: DnaB Location: 131596-132 340 bp Feature: gene Location: 132400-132726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2075 (pfam09848), FtsZ_type1 (cd02201), RVT-Retrons, DnaB (TIGR00665)

Seq: URRS01000016.1 uncultured bacterium isolate UMGS1284 genome assembly, contig: NODE_341_length_40112_cov_5.436753, whole genome shotgun sequence (40112 bp)
Overview 1 RT 1: 3845-12688 bp Neighborhood of RT #1 [3845, 12688] TPR TPR RVT-UG3 RVT-UG8 SIR2 Feature: gene Location: 3845-4498 bp Feature: gene Location: 4751-6328 bp Feature: domain Description: TPR Location: 5594-5885 bp Feature: domain Description: TPR Location: 5594-5885 bp Feature: domain Description: TPR Location: 6050-6251 bp Feature: domain Description: TPR Location: 6050-6251 bp Feature: gene Location: 6672-7898 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 6972-7425 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 6972-7425 bp Feature: gene Location: 7891-9924 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 8527-8968 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 8527-8968 bp Feature: gene Location: 10670-11884 bp Feature: domain Description: SIR2 Location: 10688-11771 bp Feature: domain Description: SIR2 Location: 10688-11771 bp Feature: gene Location: 11885-12688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), RVT-UG3, RVT-UG8, SIR2 (pfam02146)