myRT

myRT report for GCA_900550545.1_UMGS1310

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Seq: URSS01000005.1 uncultured Lachnobacterium sp. isolate UMGS1310 genome assembly, contig: NODE_24_length_113999_cov_10.742101, whole genome shotgun sequence (113999 bp)
Overview 1 RT 1: 61444-65402 bp Neighborhood of RT #1 [61444, 65402] RVT-UG26 Feature: gene Location: 61444-61623 bp Feature: gene Location: 61633-61872 bp Feature: gene Location: 62254-63450 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 62458-63064 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 62458-63064 bp Feature: gene Location: 63685-64302 bp Feature: gene Location: 64494-65402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26

Seq: URSS01000019.1 uncultured Lachnobacterium sp. isolate UMGS1310 genome assembly, contig: NODE_174_length_46902_cov_10.966828, whole genome shotgun sequence (46902 bp)
Overview 1 RT 1: 858-4018 bp Neighborhood of RT #1 [858, 4018] ParE_toxin PhdYeFM_antitox RVT-GII RVT-GII Feature: gene Location: 858-1157 bp Feature: domain Description: ParE_toxin Location: 873-1137 bp Feature: domain Description: ParE_toxin Location: 873-1137 bp Feature: gene Location: 1159-1407 bp Feature: domain Description: PhdYeFM_antitox Location: 1171-1357 bp Feature: domain Description: PhdYeFM_antitox Location: 1171-1357 bp Feature: gene Location: 1555-1932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561-1834 bp Feature: gene Location: 1971-2630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2322-2622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 32 2 -2 62 2 bp Feature: gene Location: 2630-2878 bp Feature: gene Location: 3104-4018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), PhdYeFM_antitox (pfam02604), RVT-GII

Seq: URSS01000098.1 uncultured Lachnobacterium sp. isolate UMGS1310 genome assembly, contig: NODE_7085_length_2795_cov_13.317518, whole genome shotgun sequence (2795 bp)
Overview 1 RT 1: 194-2780 bp Neighborhood of RT #1 [194, 2794] RVT-GII GIIM FixB Feature: gene Location: 194-1483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-1118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-1118 bp Feature: domain Description: GIIM Note: maturase Location: 1199-1424 bp Feature: domain Description: GIIM Note: maturase Location: 1199-1424 bp Feature: gene Location: 1575-1769 bp Feature: gene Location: 2243-2794 bp Feature: domain Description: FixB Location: 2249-2780 bp Feature: domain Description: FixB Location: 2249-2780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FixB (COG2025)