myRT

myRT report for GCA_900550645.1_UMGS1318

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Seq: URTA01000001.1 uncultured Porphyromonadaceae bacterium isolate UMGS1318 genome assembly, contig: NODE_26_length_111434_cov_5.460096, whole genome shotgun sequence (111434 bp)
Overview 1 RT 1: 59060-71315 bp Neighborhood of RT #1 [59060, 71315] YprA YprA DUF1998 RVT-UG27 Feature: gene Location: 59060-62359 bp Feature: gene Location: 62359-68553 bp Feature: domain Description: YprA Location: 62476-63211 bp Feature: domain Description: YprA Location: 62476-6321 1 bp Feature: domain Description: YprA Location: 65446-65716 bp Feature: domain Description: YprA Location: 65446-6571 6 bp Feature: domain Description: DUF1998 Location: 67093-67339 bp Feature: domain Description: DUF1 998 Location: 67093-67339 bp Feature: gene Location: 68687-69979 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 68900-69536 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 68900-69536 bp Feature: gene Location: 70132-70842 bp Feature: gene Location: 70839-71315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YprA (COG1205), DUF1998 (pfam09369), RVT-UG27

Seq: URTA01000004.1 uncultured Porphyromonadaceae bacterium isolate UMGS1318 genome assembly, contig: NODE_42_length_96633_cov_5.172089, whole genome shotgun sequence (96633 bp)
Overview 1 RT 1: 1250-4353 bp Neighborhood of RT #1 [1250, 4364] WYL RVT-Retrons rpmA Ribosomal_L21p Feature: gene Location: 1250-2203 bp Feature: domain Description: WYL Location: 1616-2147 bp Feature: domain Description: WYL Location: 1616-2 147 bp Feature: gene Location: 2311-2541 bp Feature: gene Location: 2554-3624 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2743-3316 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 743-3316 bp Feature: gene Location: 3759-4022 bp Feature: domain Description: rpmA Location: 3762-4002 bp Feature: domain Description: rpmA Location: 3762 -4002 bp Feature: gene Location: 4041-4364 bp Feature: domain Description: Ribosomal_L21p Location: 4044-4353 bp Feature: domain Description: Ribosomal_L2 1p Location: 4044-4353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), RVT-Retrons, rpmA (PRK05435), Ribosomal_L21p (pfam00829)

Seq: URTA01000006.1 uncultured Porphyromonadaceae bacterium isolate UMGS1318 genome assembly, contig: NODE_54_length_88941_cov_5.359843, whole genome shotgun sequence (88941 bp)
Overview 1 RT 1: 76638-79073 bp Neighborhood of RT #1 [76638, 79073] RVT-UG27 Feature: gene Location: 76638-76910 bp Feature: gene Location: 76932-77177 bp Feature: gene Location: 77174-78436 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 77363-77996 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 773 63 -77996 bp Feature: gene Location: 78450-78884 bp Feature: gene Location: 78906-79073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: URTA01000022.1 uncultured Porphyromonadaceae bacterium isolate UMGS1318 genome assembly, contig: NODE_209_length_37401_cov_5.244658, whole genome shotgun sequence (37401 bp)
Overview 1 RT 1: 14787-19034 bp Neighborhood of RT #1 [14787, 19276] MhpC MhpC RVT-Retrons WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep Feature: gene Location: 14787-16019 bp Feature: domain Description: MhpC Location: 15231-15579 bp Feature: domain Description: MhpC Location: 15231-15579 bp Feature: domain Description: MhpC Location: 15684-15921 bp Feature: domain Description: MhpC Location: 15684 -15921 bp Feature: gene Location: 16051-16959 bp Feature: gene Location: 16964-18121 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17165-17765 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17165-17765 bp Feature: gene Location: 18187-18408 bp Feature: gene Location: 18470-19276 bp Feature: domain Description: WG_beta_rep Location: 18587-18635 bp Feature: domain Description: WG_beta_rep Location: 18587-18635 bp Feature: domain Description: WG_beta_rep Location: 18749-18794 bp Feature: domain Description: WG_beta_rep Location: 1874 9-18794 bp Feature: domain Description: WG_beta_rep Location: 18881-18965 bp Feature: domain Description: WG_beta_rep Location: 18881-18965 bp Feature: domain Description: WG_beta_rep Location: 18965-19034 bp Feature: domain Description: WG_beta_rep Location: 18965-19034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-Retrons, WG_beta_rep (pfam14903)