myRT

myRT report for GCA_900551175.1_UMGS1374

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Seq: URUV01000016.1 uncultured Ruminococcaceae bacterium isolate UMGS1374 genome assembly, contig: NODE_520_length_22676_cov_6.298086, whole genome shotgun sequence (22676 bp)
Overview 1 RT 1: 19384-22582 bp Neighborhood of RT #1 [19384, 22674] PRK15098 PRK15098 RVT-GII Feature: gene Location: 19384-21459 bp Feature: domain Description: PRK15098 Location: 19405-20647 bp Feature: domain Description: PRK1 5098 Location: 1 9405-20647 bp Feature: domain Description: PRK15098 Location: 20677-21448 bp Feature: domain Description: PRK1 5098 Location: 20677-21 448 bp Feature: gene Location: 21588-21851 bp Feature: gene Location: 21916-22674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21967-22582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 967-22582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15098 (beta-glucosidase BglX), RVT-GII

Seq: URUV01000112.1 uncultured Ruminococcaceae bacterium isolate UMGS1374 genome assembly, contig: NODE_2816_length_7830_cov_3.787010, whole genome shotgun sequence (7830 bp)
Overview 1 RT 1: 42-5019 bp Neighborhood of RT #1 [42, 5567] INT_ICEBs1_C_like RVT-Retrons CotH CotH Feature: gene Location: 42-968 bp Feature: domain Description: INT_ICEBs1_C_like Location: 141-615 bp Feature: domain Description: INT_ICEBs1_C_like Location: 141-615 bp Feature: gene Location: 1234-2931 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1357-1957 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1357-1957 bp Feature: gene Location: 3310-3621 bp Feature: gene Location: 3654-5567 bp Feature: domain Description: CotH Location: 4605-4836 bp Feature: domain Description: CotH Location: 4605-4836 bp Feature: domain Description: CotH Location: 4890-5019 bp Feature: domain Description: CotH Location: 4890-5019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CotH (pfam08757), INT_ICEBs1_C_like (cd01189)