myRT

myRT report for GCA_900551255.1_UMGS1382

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Seq: URVH01000001.1 uncultured Tenericutes bacterium isolate UMGS1382 genome assembly, contig: NODE_13_length_216571_cov_19.106722, whole genome shotgun sequence (216571 bp)
Overview 1 RT 1: 74408-77469 bp Neighborhood of RT #1 [74408, 77738] LolA DUF378 RVT-DGRs Avd_like MutS_I Feature: gene Location: 74408-75511 bp Feature: domain Description: LolA Location: 74411-75008 bp Feature: domain Description: LolA Location: 7441 1 -75008 bp Feature: gene Location: 75691-75897 bp Feature: domain Description: DUF378 Location: 75700-75871 bp Feature: domain Description: DUF378 Location: 75700-75871 bp Feature: gene Location: 75898-76956 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 76051-76774 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 76051 -76774 bp Feature: gene Location: 76994-77341 bp Feature: domain Description: Avd_like Location: 77018-77327 bp Feature: domain Description: Avd_like Location: 7701 8-77327 bp Feature: gene Location: 77331-77738 bp Feature: domain Description: MutS_I Location: 77346-77469 bp Feature: domain Description: MutS_I Location: 77346-77469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolA (pfam03548), DUF378 (pfam04070), RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624)

Seq: URVH01000007.1 uncultured Tenericutes bacterium isolate UMGS1382 genome assembly, contig: NODE_234_length_62514_cov_19.064859, whole genome shotgun sequence (62514 bp)
Overview 1 RT 1: 3598-8638 bp Neighborhood of RT #1 [3598, 8638] COG4481 AbgT RVT-Retrons PRK09601 Feature: gene Location: 3598-3804 bp Feature: domain Description: COG4481 Location: 3601-3775 bp Feature: domain Description: COG4481 Location: 3601-3775 bp Feature: gene Location: 3785-5332 bp Feature: domain Description: AbgT Location: 3824-5324 bp Feature: domain Description: AbgT Location: 382 4-532 4 bp Feature: gene Location: 5566-6507 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5722-6274 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 572 2 -62 74 bp Feature: gene Location: 6530-7630 bp Feature: domain Description: PRK09601 Location: 6533-7628 bp Feature: domain Description: PRK09601 Location: 6533-762 8 bp Feature: gene Location: 7643-8638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4481 (Uncharacterized protein, DUF951 family ), AbgT (COG2978), RVT-Retrons, PRK09601 (redox-regulated ATPase YchF)