myRT

myRT report for GCA_900551315.1_UMGS1383

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Seq: URVN01000004.1 uncultured Tenericutes bacterium isolate UMGS1383 genome assembly, contig: NODE_89_length_68031_cov_15.138770, whole genome shotgun sequence (68031 bp)
Overview 1 RT 1: 43779-49392 bp 2 RT 2: 63777-67919 bp Neighborhood of RT #1 [43779, 49613] AAA_33 SrkA RVT-AbiP2 INT_ICEBs1_C_like COG3177 Neighborhood of RT #2 [63777, 67960] RVT-Retrons FIDO Feature: gene Location: 43779-44297 bp Feature: domain Description: AAA_33 Location: 43791-44145 bp Feature: domain Description: AAA_33 Location: 43791 -441 45 bp Feature: gene Location: 44298-45296 bp Feature: domain Description: SrkA Location: 44397-45087 bp Feature: domain Description: SrkA Location: 44397-45087 bp Feature: gene Location: 45335-46945 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 45713-46079 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4571 3-46079 bp Feature: gene Location: 47293-48480 bp Feature: domain Description: INT_ICEBs1_C_like Location: 47869-48400 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 47869-48400 bp Feature: gene Location: 48609-49613 bp Feature: domain Description: COG3177 Location: 48615-49392 bp Feature: domain Description: COG31 77 Location: 4861 5-49392 bp Feature: gene Location: 63777-64961 bp Feature: gene Location: 65267-65512 bp Feature: gene Location: 65505-66758 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65814-66366 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6581 4-66366 bp Feature: gene Location: 67187-67960 bp Feature: domain Description: FIDO Location: 67409-67919 bp Feature: domain Description: FIDO Location: 67409-6791 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_33 (pfam13671), SrkA (COG2334), RVT-AbiP2, INT_ICEBs1_C_like (cd01189), COG3177 (Fic family protein ), RVT-Retrons, FIDO (COG2184)

Seq: URVN01000011.1 uncultured Tenericutes bacterium isolate UMGS1383 genome assembly, contig: NODE_199_length_48433_cov_13.233229, whole genome shotgun sequence (48433 bp)
Overview 1 RT 1: 2-2873 bp Neighborhood of RT #1 [2, 3067] RVT-DGRs Avd_like MutS_I Feature: gene Location: 2-865 bp Feature: gene Location: 1218-2201 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1302-1986 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1302 -1986 bp Feature: gene Location: 2296-2535 bp Feature: domain Description: Avd_like Location: 2302-2524 bp Feature: domain Description: Avd_like Location: 2 302 -2 52 4 bp Feature: gene Location: 2645-3067 bp Feature: domain Description: MutS_I Location: 2681-2873 bp Feature: domain Description: MutS_I Location: 2 681-2 873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624)

Seq: URVN01000018.1 uncultured Tenericutes bacterium isolate UMGS1383 genome assembly, contig: NODE_584_length_23188_cov_14.153909, whole genome shotgun sequence (23188 bp)
Overview 1 RT 1: 2204-5648 bp Neighborhood of RT #1 [2204, 5728] MutS MutS Avd_like RVT-DGRs ECM27 FtsA Feature: gene Location: 2204-2560 bp Feature: domain Description: MutS Location: 2216-2450 bp Feature: domain Description: MutS Location: 2216-2450 bp Feature: domain Description: MutS Location: 2465-2552 bp Feature: domain Description: MutS Location: 2465-2552 bp Feature: gene Location: 2659-2913 bp Feature: domain Description: Avd_like Location: 2665-2899 bp Feature: domain Description: Avd_like Location: 2665-2899 bp Feature: gene Location: 2934-3935 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3111-3714 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 111-3 714 bp Feature: gene Location: 4057-4416 bp Feature: domain Description: ECM27 Location: 4201-4414 bp Feature: domain Description: ECM27 Location: 4201-4414 bp Feature: gene Location: 4463-5728 bp Feature: domain Description: FtsA Location: 4469-5648 bp Feature: domain Description: FtsA Location: 4469-5648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS (COG0249), Avd_like (cd16376), RVT-DGRs, ECM27 (COG0530), FtsA (smart00842)