myRT

myRT report for GCA_900551415.1_UMGS1400

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Seq: URWB01000001.1 uncultured Clostridiales bacterium isolate UMGS1400 genome assembly, contig: NODE_154_length_57664_cov_5.329532, whole genome shotgun sequence (57664 bp)
Overview 1 RT 1: 16204-21820 bp Neighborhood of RT #1 [16204, 21834] PRK12735 RVT-GII COG1373 TetR_N TetR_C_4 Feature: gene Location: 16204-17397 bp Feature: domain Description: PRK12735 Location: 16207-17395 bp Feature: domain Description: PRK1 2735 Location: 1 6207-1 7395 bp Feature: gene Location: 17578-17772 bp Feature: gene Location: 18484-19764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18733-19396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8733-1 9396 bp Feature: gene Location: 19910-21232 bp Feature: domain Description: COG1373 Location: 19943-21218 bp Feature: domain Description: COG1 373 Location: 1 9943-21 21 8 bp Feature: gene Location: 21250-21834 bp Feature: domain Description: TetR_N Location: 21289-21421 bp Feature: domain Description: TetR_N Location: 21 289-21 421 bp Feature: domain Description: TetR_C_4 Location: 21454-21820 bp Feature: domain Description: TetR_C_4 Location: 21 454-21 820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12735 (elongation factor Tu; Reviewed), RVT-GII, COG1373 (Predicted ATPase, AAA+ superfamily ), TetR_N (pfam00440), TetR_C_4 (pfam08359)

Seq: URWB01000106.1 uncultured Clostridiales bacterium isolate UMGS1400 genome assembly, contig: NODE_4408_length_7684_cov_3.815441, whole genome shotgun sequence (7684 bp)
Overview 1 RT 1: 3588-6848 bp Neighborhood of RT #1 [3588, 7681] BDH LCB5 RVT-GII Feature: gene Location: 3588-4916 bp Feature: domain Description: BDH Location: 3738-4899 bp Feature: domain Description: BDH Location: 3738-4899 bp Feature: gene Location: 5061-6215 bp Feature: domain Description: LCB5 Location: 5241-6183 bp Feature: domain Description: LCB5 Location: 52 41-6183 bp Feature: gene Location: 6404-7681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6410-6848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6410-6848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BDH (cd08187), LCB5 (COG1597), RVT-GII