myRT

myRT report for GCA_900552665.1_UMGS1533

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Seq: USAS01000213.1 uncultured Roseburia sp. isolate UMGS1533 genome assembly, contig: NODE_5343_length_5339_cov_4.737509, whole genome shotgun sequence (5339 bp)
Overview 1 RT 1: 1140-5148 bp Neighborhood of RT #1 [1140, 5207] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII TraG_VirD4 Feature: gene Location: 1140-2123 bp Feature: domain Description: INT_RitB_C_like Location: 1476-2061 bp Feature: domain Description: INT_RitB_C_like Location: 1 476-2061 bp Feature: gene Location: 2384-3352 bp Feature: domain Description: Phage_int_SAM_1 Location: 2738-2960 bp Feature: domain Description: Phage_int_SAM_1 Location: 2738-2960 bp Feature: domain Description: INT_RitA_C_like Location: 3053-3305 bp Feature: domain Description: INT_RitA_C_like Location: 3053-3305 bp Feature: gene Location: 3468-4223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3780-4173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3780-41 73 bp Feature: gene Location: 4381-4701 bp Feature: gene Location: 4851-5207 bp Feature: domain Description: TraG_VirD4 Location: 4950-5148 bp Feature: domain Description: TraG_VirD4 Location: 4950-51 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII, TraG_VirD4