myRT

myRT report for GCA_900553275.1_UMGS1604

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Seq: USDA01000002.1 uncultured Clostridium sp. isolate UMGS1604 genome assembly, contig: NODE_64_length_112027_cov_8.289537, whole genome shotgun sequence (112027 bp)
Overview 1 RT 1: 76593-80100 bp Neighborhood of RT #1 [76593, 80138] HTH_XRE TIGR00370 RVT-DGRs AbiEii COG5340 Feature: gene Location: 76593-76946 bp Feature: domain Description: HTH_XRE Location: 76626-76785 bp Feature: domain Description: HTH_XRE Location: 76626-76785 bp Feature: gene Location: 77074-77352 bp Feature: domain Description: TIGR00370 Location: 77119-77332 bp Feature: domain Description: TIGR00370 Location: 771 1 9-77332 bp Feature: gene Location: 77769-78770 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 78036-78627 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 78036-78627 bp Feature: gene Location: 78775-79596 bp Feature: domain Description: AbiEii Location: 78877-79405 bp Feature: domain Description: AbiEii Location: 78877-79405 bp Feature: gene Location: 79596-80138 bp Feature: domain Description: COG5340 Location: 79680-80100 bp Feature: domain Description: COG5340 Location: 79680-801 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), TIGR00370 (sensor histidine kinase inhibitor, KipI family), RVT-DGRs, AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system )

Seq: USDA01000006.1 uncultured Clostridium sp. isolate UMGS1604 genome assembly, contig: NODE_188_length_60814_cov_10.948781, whole genome shotgun sequence (60814 bp)
Overview 1 RT 1: 56932-59184 bp Neighborhood of RT #1 [56932, 59321] SSB RVT-DGRs Avd_like MutS_I Feature: gene Location: 56932-57171 bp Feature: domain Description: SSB Location: 56935-57148 bp Feature: domain Description: SSB Location: 56935-57148 bp Feature: gene Location: 57324-57470 bp Feature: gene Location: 57523-58482 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57679-58288 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57679-582 88 bp Feature: gene Location: 58520-58915 bp Feature: domain Description: Avd_like Location: 58577-58898 bp Feature: domain Description: Avd_like Location: 58577-58898 bp Feature: gene Location: 58893-59321 bp Feature: domain Description: MutS_I Location: 58923-59184 bp Feature: domain Description: MutS_I Location: 5892 3-59184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB (pfam00436), RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624)