myRT

myRT report for GCA_900553385.1_UMGS1614

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Seq: USDR01000059.1 uncultured Mollicutes bacterium isolate UMGS1614 genome assembly, contig: NODE_2077_length_5874_cov_5.025606, whole genome shotgun sequence (5874 bp)
Overview 1 RT 1: 377-3203 bp Neighborhood of RT #1 [377, 3235] RVT-UG2 RVT-UG2 CxxCG_CxxCG_HTH GepA MqsR_toxin Feature: gene Location: 377-796 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 614-794 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 61 4-794 bp Feature: gene Location: 827-1699 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 830-1427 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 830-1 427 bp Feature: gene Location: 1824-2825 bp Feature: domain Description: CxxCG_CxxCG_HTH Location: 1854-2226 bp Feature: domain Description: CxxCG_CxxCG_HTH Location: 1 854-2226 bp Feature: domain Description: GepA Location: 2364-2751 bp Feature: domain Description: GepA Location: 2364-2751 bp Feature: gene Location: 2849-3235 bp Feature: domain Description: MqsR_toxin Location: 2885-3203 bp Feature: domain Description: MqsR_toxin Location: 2885-3203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, CxxCG_CxxCG_HTH (TIGR03830), GepA (COG3600), MqsR_toxin (pfam15723)

Seq: USDR01000109.1 uncultured Mollicutes bacterium isolate UMGS1614 genome assembly, contig: NODE_2860_length_4519_cov_7.500896, whole genome shotgun sequence (4519 bp)
Overview 1 RT 1: 1-2691 bp Neighborhood of RT #1 [1, 2720] RVT-DGRs PHA00653 Feature: gene Location: 1-252 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-250 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-2 50 bp Feature: gene Location: 267-521 bp Feature: gene Location: 894-2720 bp Feature: domain Description: PHA00653 Location: 1785-2691 bp Feature: domain Description: PHA00653 Location: 1785-2 691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, PHA00653 (mtd;major tropism determinant)