myRT

myRT report for GCA_900553405.1_UMGS1612

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Seq: USDF01000004.1 uncultured Clostridium sp. isolate UMGS1612 genome assembly, contig: NODE_187_length_48015_cov_4.257298, whole genome shotgun sequence (48015 bp)
Overview 1 RT 1: 45222-47427 bp Neighborhood of RT #1 [45222, 47567] RVT-DGRs Avd_like MutS_I Feature: gene Location: 45222-45506 bp Feature: gene Location: 45640-45771 bp Feature: gene Location: 45962-46471 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45965-46448 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45965-46448 bp Feature: gene Location: 46795-47157 bp Feature: domain Description: Avd_like Location: 46825-47134 bp Feature: domain Description: Avd_like Location: 46825-471 34 bp Feature: gene Location: 47166-47567 bp Feature: domain Description: MutS_I Location: 47196-47427 bp Feature: domain Description: MutS_I Location: 471 96-47427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624)

Seq: USDF01000064.1 uncultured Clostridium sp. isolate UMGS1612 genome assembly, contig: NODE_4763_length_4411_cov_3.852158, whole genome shotgun sequence (4411 bp)
Overview 1 RT 1: 3-3582 bp Neighborhood of RT #1 [3, 3587] RVT-DGRs MutS PRK00215 Feature: gene Location: 3-296 bp Feature: gene Location: 875-1978 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1085-1763 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1085-1763 bp Feature: gene Location: 2327-2761 bp Feature: domain Description: MutS Location: 2336-2729 bp Feature: domain Description: MutS Location: 2 336-2 72 9 bp Feature: gene Location: 2931-3587 bp Feature: domain Description: PRK00215 Location: 2961-3582 bp Feature: domain Description: PRK002 15 Location: 2 961-3582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS (COG0249), PRK00215 (transcriptional repressor LexA), RVT-DGRs

Seq: USDF01000075.1 uncultured Clostridium sp. isolate UMGS1612 genome assembly, contig: NODE_10829_length_2208_cov_4.252671, whole genome shotgun sequence (2208 bp)
Overview 1 RT 1: 669-1872 bp Neighborhood of RT #1 [669, 1937] RVT-GII GIIM Feature: gene Location: 669-1937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918-1587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918-1587 bp Feature: domain Description: GIIM Note: maturase Location: 1656-1872 bp Feature: domain Description: GIIM Note: maturase Location: 1656-1872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)