myRT

myRT report for GCA_900553435.1_UMGS1611

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Seq: USDC01000071.1 uncultured Tenericutes bacterium isolate UMGS1611 genome assembly, contig: NODE_6553_length_4704_cov_2.976124, whole genome shotgun sequence (4704 bp)
Overview 1 RT 1: 2-4698 bp Neighborhood of RT #1 [2, 4703] SR_TndX_transposase Recombinase HTH_36 RVT-Retrons PRK15483 Feature: gene Location: 2-829 bp Feature: domain Description: SR_TndX_transposase Location: 47-473 bp Feature: domain Description: SR_TndX_transposase Location: 47-473 bp Feature: domain Description: Recombinase Location: 575-812 bp Feature: domain Description: Recombinase Location: 575-81 2 bp Feature: gene Location: 1059-1574 bp Feature: domain Description: HTH_36 Location: 1122-1284 bp Feature: domain Description: HTH_36 Location: 1 1 22-1 284 bp Feature: gene Location: 1895-3127 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2108-2702 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 08-2702 bp Feature: gene Location: 3199-3423 bp Feature: gene Location: 3726-4703 bp Feature: domain Description: PRK15483 Location: 3732-4698 bp Feature: domain Description: PRK1 5483 Location: 3732-4698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), HTH_36 (pfam13730), RVT-Retrons, PRK15483 (type III restriction-modification system endonuclease)

Seq: USDC01000152.1 uncultured Tenericutes bacterium isolate UMGS1611 genome assembly, contig: NODE_11967_length_2395_cov_2.021368, whole genome shotgun sequence (2395 bp)
Overview 1 RT 1: 1-2343 bp Neighborhood of RT #1 [1, 2343] RVT-UG14 RVT-UG14 Feature: gene Location: 1-1107 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 352-424 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 352 -42 4 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 436-709 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 436-709 bp Feature: gene Location: 1294-1500 bp Feature: gene Location: 1507-2343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14