myRT

myRT report for GCA_900553485.1_UMGS1619

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Seq: USDS01000019.1 uncultured Clostridium sp. isolate UMGS1619 genome assembly, contig: NODE_2443_length_15075_cov_3.124700, whole genome shotgun sequence (15075 bp)
Overview 1 RT 1: 2398-5823 bp Neighborhood of RT #1 [2398, 5823] RVT-UG27 Feature: gene Location: 2398-2880 bp Feature: gene Location: 2886-3209 bp Feature: gene Location: 3222-4490 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 3411-4050 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 341 1 -4050 bp Feature: gene Location: 4493-5152 bp Feature: gene Location: 5137-5823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: USDS01000176.1 uncultured Clostridium sp. isolate UMGS1619 genome assembly, contig: NODE_6213_length_6290_cov_3.004330, whole genome shotgun sequence (6290 bp)
Overview 1 RT 1: 1-4649 bp Neighborhood of RT #1 [1, 4649] RVT-UNC dnaG Feature: gene Location: 1-2370 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 448-949 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 448-949 bp Feature: gene Location: 2372-4249 bp Feature: domain Description: dnaG Location: 2555-3716 bp Feature: domain Description: dnaG Location: 2 555-3716 bp Feature: gene Location: 4290-4649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19/RVT-UG10/RVT-UG23/RVT-UG25(RVT-UNC), dnaG (TIGR01391)

Seq: USDS01000208.1 uncultured Clostridium sp. isolate UMGS1619 genome assembly, contig: NODE_6864_length_5626_cov_6.664872, whole genome shotgun sequence (5626 bp)
Overview 1 RT 1: 307-5432 bp Neighborhood of RT #1 [307, 5464] RES RVT-UG14 ABC2_membrane CcmA Feature: gene Location: 307-1470 bp Feature: domain Description: RES Location: 559-922 bp Feature: domain Description: RES Location: 559-922 bp Feature: gene Location: 1527-3074 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 1878-2232 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 1878-223 2 bp Feature: gene Location: 3657-4553 bp Feature: domain Description: ABC2_membrane Location: 3672-4344 bp Feature: domain Description: ABC2_membrane Location: 3 672-43 44 bp Feature: gene Location: 4550-5464 bp Feature: domain Description: CcmA Location: 4553-5432 bp Feature: domain Description: CcmA Location: 4553 -543 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RES (smart00953), RVT-UG14, ABC2_membrane (pfam01061), CcmA (COG4133)

Seq: USDS01000447.1 uncultured Clostridium sp. isolate UMGS1619 genome assembly, contig: NODE_10488_length_3586_cov_2.882186, whole genome shotgun sequence (3586 bp)
Overview 1 RT 1: 2-3440 bp Neighborhood of RT #1 [2, 3440] COG1373 RVT-AbiP2 Hypoth_Ymh Feature: gene Location: 2-700 bp Feature: domain Description: COG1373 Location: 5-680 bp Feature: domain Description: COG1373 Location: 5-680 bp Feature: gene Location: 759-2282 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1188-1644 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1188-164 4 bp Feature: gene Location: 2307-3101 bp Feature: domain Description: Hypoth_Ymh Location: 2724-3078 bp Feature: domain Description: Hypoth_Ymh Location: 2724 -3078 bp Feature: gene Location: 3174-3440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-AbiP2, Hypoth_Ymh (pfam09509)

Seq: USDS01000781.1 uncultured Clostridium sp. isolate UMGS1619 genome assembly, contig: NODE_16334_length_2224_cov_2.482250, whole genome shotgun sequence (2224 bp)
Overview 1 RT 1: 1-2223 bp Neighborhood of RT #1 [1, 2223] RVT-DGRs DUF1566 RVT-DGRs Feature: gene Location: 1-348 bp Feature: gene Location: 339-890 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 345-615 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 345 -615 bp Feature: gene Location: 964-2037 bp Feature: domain Description: DUF1566 Location: 1243-1528 bp Feature: domain Description: DUF15 66 Location: 1243-15 28 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1717-2023 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1717-2023 bp Feature: gene Location: 2065-2223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF1566 (pfam07603)