myRT

myRT report for GCA_900553495.1_UMGS1626

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Seq: USDY01000215.1 uncultured Ruminococcaceae bacterium isolate UMGS1626 genome assembly, contig: NODE_12187_length_4666_cov_3.084580, whole genome shotgun sequence (4666 bp)
Overview 1 RT 1: 3-4664 bp Neighborhood of RT #1 [3, 4663] RVT-GII HNHc TraG-D_C Phage_int_SAM_3 INT_ICEBs1_C_like Feature: gene Location: 3-293 bp Feature: gene Location: 687-821 bp Feature: gene Location: 988-2847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1288-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 288-2029 bp Feature: domain Description: HNHc Note: nucleases Location: 2575-2737 bp Feature: domain Description: HNHc Note: nucleases Location: 2575-2737 bp Feature: gene Location: 2954-3595 bp Feature: domain Description: TraG-D_C Location: 2990-3320 bp Feature: domain Description: TraG-D_C Location: 2990-3320 bp Feature: gene Location: 3872-4663 bp Feature: domain Description: Phage_int_SAM_3 Location: 4064-4226 bp Feature: domain Description: Phage_int_SAM_3 Location: 4064-4226 bp Feature: domain Description: INT_ICEBs1_C_like Location: 4415-4664 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 441 5-4664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-GII, HNHc (smart00507)