myRT

myRT report for GCA_900553625.1_UMGS1630

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Seq: USEA01000005.1 uncultured Clostridium sp. isolate UMGS1630 genome assembly, contig: NODE_63_length_84884_cov_10.400264, whole genome shotgun sequence (84884 bp)
Overview 1 RT 1: 57660-62321 bp Neighborhood of RT #1 [57660, 62335] hsdM RVT-UG2 Sod_Cu Feature: gene Location: 57660-58448 bp Feature: gene Location: 58454-60013 bp Feature: domain Description: hsdM Location: 58478-59975 bp Feature: domain Description: hsdM Location: 58478-59975 bp Feature: gene Location: 60139-61434 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 60322-61138 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 60322-61 1 38 bp Feature: gene Location: 61818-61949 bp Feature: gene Location: 62051-62335 bp Feature: domain Description: Sod_Cu Location: 62075-62321 bp Feature: domain Description: Sod_Cu Location: 62075-62321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hsdM (TIGR00497), RVT-UG2, Sod_Cu (pfam00080)

Seq: USEA01000013.1 uncultured Clostridium sp. isolate UMGS1630 genome assembly, contig: NODE_195_length_55663_cov_10.256708, whole genome shotgun sequence (55663 bp)
Overview 1 RT 1: 47833-55406 bp Neighborhood of RT #1 [47833, 55414] PRK09098 PRK09098 RVT-DGRs Avd_like ileS Feature: gene Location: 47833-48270 bp Feature: domain Description: PRK09098 Location: 47989-48091 bp Feature: domain Description: PRK09098 Location: 47989-48091 bp Feature: domain Description: PRK09098 Location: 48106-48226 bp Feature: domain Description: PRK09098 Location: 48106-482 2 6 bp Feature: gene Location: 48450-50138 bp Feature: gene Location: 50731-51837 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50944-51559 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50944-51559 bp Feature: gene Location: 51822-52190 bp Feature: domain Description: Avd_like Location: 51861-52179 bp Feature: domain Description: Avd_like Location: 51861-52 179 bp Feature: gene Location: 52652-55414 bp Feature: domain Description: ileS Location: 52670-55406 bp Feature: domain Description: ileS Location: 52 670-55406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09098 (HrpE/YscL family type III secretion apparatus protein), RVT-DGRs, Avd_like (cd16376), ileS (TIGR00392)

Seq: USEA01000028.1 uncultured Clostridium sp. isolate UMGS1630 genome assembly, contig: NODE_2834_length_7643_cov_10.540327, whole genome shotgun sequence (7643 bp)
Overview 1 RT 1: 354-7500 bp Neighborhood of RT #1 [354, 7500] AE_Prim_S_like RVT-UG10 Feature: gene Location: 354-2906 bp Feature: gene Location: 2903-5392 bp Feature: domain Description: AE_Prim_S_like Location: 3044-3455 bp Feature: domain Description: AE_Prim_S_like Location: 3 044-3 455 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 4232-4853 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 423 2-4853 bp Feature: gene Location: 5403-6089 bp Feature: gene Location: 6820-7500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10