myRT

myRT report for GCA_900553705.1_UMGS1638

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Seq: USEK01000036.1 uncultured Collinsella sp. isolate UMGS1638 genome assembly, contig: NODE_937_length_10792_cov_4.819596, whole genome shotgun sequence (10792 bp)
Overview 1 RT 1: 2-3016 bp Neighborhood of RT #1 [2, 3016] RVT-DGRs Feature: gene Location: 2-133 bp Feature: gene Location: 239-709 bp Feature: gene Location: 1074-2276 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1350-1950 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 350-1 950 bp Feature: gene Location: 2273-2518 bp Feature: gene Location: 2603-3016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: USEK01000130.1 uncultured Collinsella sp. isolate UMGS1638 genome assembly, contig: NODE_3629_length_4592_cov_7.038351, whole genome shotgun sequence (4592 bp)
Overview 1 RT 1: 3-3453 bp Neighborhood of RT #1 [3, 3458] RVT-Retrons HTH_28 HTH_28 Tra5 Feature: gene Location: 3-401 bp Feature: gene Location: 881-2050 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1088-1664 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1088-1664 bp Feature: gene Location: 2095-2586 bp Feature: domain Description: HTH_28 Location: 2143-2266 bp Feature: domain Description: HTH_2 8 Location: 2 143-2 2 66 bp Feature: domain Description: HTH_28 Location: 2305-2467 bp Feature: domain Description: HTH_2 8 Location: 2 305-2 467 bp Feature: gene Location: 2790-3458 bp Feature: domain Description: Tra5 Location: 2844-3453 bp Feature: domain Description: Tra5 Location: 2 844-3453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_28 (pfam13518), Tra5 (COG2801)