myRT

myRT report for GCA_900553915.1_UMGS1659

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Seq: USFE01000002.1 uncultured Ruminococcus sp. isolate UMGS1659 genome assembly, contig: NODE_253_length_31676_cov_3.785238, whole genome shotgun sequence (31676 bp)
Overview 1 RT 1: 26983-30956 bp Neighborhood of RT #1 [26983, 30961] RVT-GII Maff2 Feature: gene Location: 26983-27855 bp Feature: gene Location: 27871-28113 bp Feature: gene Location: 28232-29998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28559-29297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28559-29297 bp Feature: gene Location: 30413-30703 bp Feature: gene Location: 30713-30961 bp Feature: domain Description: Maff2 Location: 30833-30956 bp Feature: domain Description: Maff2 Location: 30833-30956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Maff2 (pfam12750)

Seq: USFE01000214.1 uncultured Ruminococcus sp. isolate UMGS1659 genome assembly, contig: NODE_1747_length_5104_cov_2.676570, whole genome shotgun sequence (5104 bp)
Overview 1 RT 1: 284-3818 bp Neighborhood of RT #1 [284, 3835] ATC_hydrolase PRK10562 RVT-GII ABC2_membrane_5 Feature: gene Location: 284-598 bp Feature: domain Description: ATC_hydrolase Location: 347-560 bp Feature: domain Description: ATC_hydrolase Location: 347-560 bp Feature: gene Location: 693-1118 bp Feature: domain Description: PRK10562 Location: 696-1113 bp Feature: domain Description: PRK10562 Location: 696-1113 bp Feature: gene Location: 1250-2545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1505-2195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1505-2 195 bp Feature: gene Location: 2635-2880 bp Feature: gene Location: 3179-3835 bp Feature: domain Description: ABC2_membrane_5 Location: 3188-3818 bp Feature: domain Description: ABC2 _membrane_5 Location: 3188-3818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ATC_hydrolase (pfam14196), PRK10562 (putative acetyltransferase; Provisional)

Seq: USFE01000370.1 uncultured Ruminococcus sp. isolate UMGS1659 genome assembly, contig: NODE_3004_length_3326_cov_2.474473, whole genome shotgun sequence (3326 bp)
Overview 1 RT 1: 323-3013 bp Neighborhood of RT #1 [323, 3013] WcaA RVT-GII GIIM HTH_32 rve Feature: gene Location: 323-529 bp Feature: domain Description: WcaA Location: 326-515 bp Feature: domain Description: WcaA Location: 3 26-515 bp Feature: gene Location: 474-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483 -73 2 bp Feature: domain Description: GIIM Note: maturase Location: 798-1005 bp Feature: domain Description: GIIM Note: maturase Location: 798-1005 bp Feature: gene Location: 1468-2733 bp Feature: domain Description: HTH_32 Location: 1651-1876 bp Feature: domain Description: HTH_3 2 Location: 1651-1876 bp Feature: domain Description: rve Location: 1954-2299 bp Feature: domain Description: rve Location: 1954-2299 bp Feature: gene Location: 2765-3013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), rve (pfam00665), WcaA (TIGR04017), RVT-GII, GIIM (pfam08388)

Seq: USFE01000558.1 uncultured Ruminococcus sp. isolate UMGS1659 genome assembly, contig: NODE_5281_length_2192_cov_2.075807, whole genome shotgun sequence (2192 bp)
Overview 1 RT 1: 193-1942 bp Neighborhood of RT #1 [193, 1980] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 193-1980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 63-1255 bp Feature: domain Description: Intron_maturas2 Location: 1360-1573 bp Feature: domain Description: Intron_maturas2 Location: 1360-1573 bp Feature: domain Description: HNHc Note: nucleases Location: 1756-1942 bp Feature: domain Description: HNHc Note: nucleases Location: 1756-194 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)