myRT

myRT report for GCA_900554055.1_UMGS1681

Download annotations/find similar RTs

Seq: USFQ01000001.1 uncultured Clostridium sp. isolate UMGS1681 genome assembly, contig: NODE_154_length_104436_cov_5.673168, whole genome shotgun sequence (104436 bp)
Overview 1 RT 1: 41732-47747 bp Neighborhood of RT #1 [41732, 47839] CBAH RVT-UNC HTH_XRE COG3177 Feature: gene Location: 41732-42706 bp Feature: domain Description: CBAH Location: 41738-42665 bp Feature: domain Description: CBAH Location: 41 738-42665 bp Feature: gene Location: 43031-43324 bp Feature: gene Location: 43507-45513 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 43933-44401 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 43933-44401 bp Feature: gene Location: 45531-46838 bp Feature: gene Location: 46901-47839 bp Feature: domain Description: HTH_XRE Location: 46913-47081 bp Feature: domain Description: HTH_XRE Location: 4691 3-47081 bp Feature: domain Description: COG3177 Location: 47165-47747 bp Feature: domain Description: COG31 77 Location: 471 65-47747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CBAH (pfam02275), RVT-UG16/RVT-UG20/RVT-UG13/RVT-CRISPR(RVT-UNC), HTH_XRE (smart00530), COG3177 (Fic family protein )

Seq: USFQ01000029.1 uncultured Clostridium sp. isolate UMGS1681 genome assembly, contig: NODE_1805_length_14998_cov_5.465435, whole genome shotgun sequence (14998 bp)
Overview 1 RT 1: 182-4199 bp Neighborhood of RT #1 [182, 4348] FGE-sulfatase Avd_like RVT-DGRs MutS_I Feature: gene Location: 182-1783 bp Feature: domain Description: FGE-sulfatase Location: 1508-1769 bp Feature: domain Description: FGE-sulfatase Location: 1508-1769 bp Feature: gene Location: 1927-2298 bp Feature: domain Description: Avd_like Location: 1960-2269 bp Feature: domain Description: Avd_like Location: 1960-2 2 69 bp Feature: gene Location: 2270-3415 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2483-3098 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 483-3098 bp Feature: gene Location: 3688-3948 bp Feature: gene Location: 3953-4348 bp Feature: domain Description: MutS_I Location: 3971-4199 bp Feature: domain Description: MutS_I Location: 3971-4199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, MutS_I (pfam01624)