myRT

myRT report for GCA_900554125.1_UMGS1687

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Seq: USGB01000231.1 uncultured Butyrivibrio sp. isolate UMGS1687 genome assembly, contig: NODE_3236_length_3971_cov_1.293412, whole genome shotgun sequence (3971 bp)
Overview 1 RT 1: 1-2758 bp Neighborhood of RT #1 [1, 2758] RVT-DGRs RVT-DGRs Feature: gene Location: 1-570 bp Feature: gene Location: 943-1560 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1159-1501 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 59-1 501 bp Feature: gene Location: 1563-1850 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1566-1746 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 566-1 746 bp Feature: gene Location: 1959-2291 bp Feature: gene Location: 2435-2758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: USGB01000302.1 uncultured Butyrivibrio sp. isolate UMGS1687 genome assembly, contig: NODE_4386_length_3175_cov_2.157051, whole genome shotgun sequence (3175 bp)
Overview 1 RT 1: 3-3156 bp Neighborhood of RT #1 [3, 3173] RVT-DGRs PHA00653 PHA00653 Feature: gene Location: 3-785 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 210-786 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 10-786 bp Feature: gene Location: 1158-3173 bp Feature: domain Description: PHA00653 Location: 2214-2721 bp Feature: domain Description: PHA00653 Location: 2 2 14-2 72 1 bp Feature: domain Description: PHA00653 Location: 2742-3156 bp Feature: domain Description: PHA00653 Location: 2 742 -3156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, PHA00653 (mtd;major tropism determinant)

Seq: USGB01000333.1 uncultured Butyrivibrio sp. isolate UMGS1687 genome assembly, contig: NODE_4836_length_2941_cov_0.984407, whole genome shotgun sequence (2941 bp)
Overview 1 RT 1: 819-2936 bp Neighborhood of RT #1 [819, 2938] RVT-Retrons COG2865 Feature: gene Location: 819-1025 bp Feature: gene Location: 1370-1546 bp Feature: gene Location: 1539-2567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1680-2229 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1680-2229 bp Feature: gene Location: 2513-2938 bp Feature: domain Description: COG2865 Location: 2522-2936 bp Feature: domain Description: COG2865 Location: 2522-293 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: USGB01000523.1 uncultured Butyrivibrio sp. isolate UMGS1687 genome assembly, contig: NODE_7919_length_2021_cov_1.097660, whole genome shotgun sequence (2021 bp)
Overview 1 RT 1: 2-2018 bp Neighborhood of RT #1 [2, 2018] RVT-AbiA Feature: gene Location: 2-1324 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 350-875 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 350-875 bp Feature: gene Location: 1626-2018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiA