myRT

myRT report for GCA_900554435.1_UMGS1710

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Seq: USHC01000047.1 uncultured Bacteroides sp. isolate UMGS1710 genome assembly, contig: NODE_439_length_18301_cov_2.983996, whole genome shotgun sequence (18301 bp)
Overview 1 RT 1: 9666-16529 bp Neighborhood of RT #1 [9666, 16546] RloB RVT-Retrons PMT_2 GDP-M1P_Guanylyltransferase ManC Feature: gene Location: 9666-10304 bp Feature: domain Description: RloB Location: 9723-10284 bp Feature: domain Description: RloB Location: 9723-1 0284 bp Feature: gene Location: 10654-11355 bp Feature: gene Location: 11528-13519 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12674-13190 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2674-1 31 90 bp Feature: gene Location: 13524-15182 bp Feature: domain Description: PMT_2 Location: 13926-14301 bp Feature: domain Description: PMT_2 Location: 1 3926-1 4301 bp Feature: gene Location: 15227-16546 bp Feature: domain Description: GDP-M1P_Guanylyltransferase Location: 15230-16010 bp Feature: domain Description: GDP-M1 P_Guanylyltransferase Location: 1 5230-1 601 0 bp Feature: domain Description: ManC Location: 16232-16529 bp Feature: domain Description: ManC Location: 1 6232-1 6529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PMT_2 (pfam13231), GDP-M1P_Guanylyltransferase (cd02509), ManC (COG0662), RloB (pfam13707)

Seq: USHC01000171.1 uncultured Bacteroides sp. isolate UMGS1710 genome assembly, contig: NODE_1095_length_8915_cov_3.860271, whole genome shotgun sequence (8915 bp)
Overview 1 RT 1: 3929-7898 bp Neighborhood of RT #1 [3929, 7898] COG3943 RVT-GII Feature: gene Location: 3929-4933 bp Feature: domain Description: COG3943 Location: 3965-4919 bp Feature: domain Description: COG3943 Location: 3965-4919 bp Feature: gene Location: 5148-5351 bp Feature: gene Location: 5954-7249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6209-6899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 09-6899 bp Feature: gene Location: 7339-7584 bp Feature: gene Location: 7740-7898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3943 (Uncharacterized conserved protein ), RVT-GII

Seq: USHC01000426.1 uncultured Bacteroides sp. isolate UMGS1710 genome assembly, contig: NODE_3132_length_3671_cov_3.077710, whole genome shotgun sequence (3671 bp)
Overview 1 RT 1: 110-2035 bp Neighborhood of RT #1 [110, 2121] RVT-GII GIIM DDE_3 Feature: gene Location: 110-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113 -647 bp Feature: domain Description: GIIM Note: maturase Location: 710-938 bp Feature: domain Description: GIIM Note: maturase Location: 710-93 8 bp Feature: gene Location: 1257-1400 bp Feature: gene Location: 1486-2121 bp Feature: domain Description: DDE_3 Location: 1507-2035 bp Feature: domain Description: DDE_3 Location: 1507-203 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)

Seq: USHC01000535.1 uncultured Bacteroides sp. isolate UMGS1710 genome assembly, contig: NODE_4338_length_2817_cov_3.417813, whole genome shotgun sequence (2817 bp)
Overview 1 RT 1: 364-2581 bp Neighborhood of RT #1 [364, 2691] RVT-GII HNHc Feature: gene Location: 364-612 bp Feature: gene Location: 811-2691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1144-1861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114 4 -1861 bp Feature: domain Description: HNHc Note: nucleases Location: 2443-2581 bp Feature: domain Description: HNHc Note: nucleases Location: 24 4 3-2581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)