myRT

myRT report for GCA_900554695.1_UMGS1741

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Seq: USHV01000004.1 uncultured Prevotella sp. isolate UMGS1741 genome assembly, contig: NODE_108_length_104386_cov_17.179506, whole genome shotgun sequence (104386 bp)
Overview 1 RT 1: 52-3156 bp Neighborhood of RT #1 [52, 3194] RVT-Retrons WG_beta_rep WG_beta_rep WYL Feature: gene Location: 52-1182 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 250-850 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 250-850 bp Feature: gene Location: 1550-2077 bp Feature: domain Description: WG_beta_rep Location: 1616-1718 bp Feature: domain Description: WG_beta_rep Location: 1 61 6-1 71 8 bp Feature: domain Description: WG_beta_rep Location: 1751-1820 bp Feature: domain Description: WG_beta_rep Location: 1 751 -1 820 bp Feature: gene Location: 2118-3194 bp Feature: domain Description: WYL Location: 2601-3156 bp Feature: domain Description: WYL Location: 2601 -31 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WG_beta_rep (pfam14903), WYL (pfam13280), RVT-Retrons

Seq: USHV01000034.1 uncultured Prevotella sp. isolate UMGS1741 genome assembly, contig: NODE_1022_length_32014_cov_19.168528, whole genome shotgun sequence (32014 bp)
Overview 1 RT 1: 233-4375 bp Neighborhood of RT #1 [233, 4375] COG3943 RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 233-586 bp Feature: domain Description: COG3943 Location: 266-530 bp Feature: domain Description: COG3943 Location: 2 66-530 bp Feature: gene Location: 866-2674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130-1952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130-1952 bp Feature: domain Description: Intron_maturas2 Location: 2078-2333 bp Feature: domain Description: Intron_maturas2 Location: 2 078-2 333 bp Feature: gene Location: 3225-4433 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3258-3555 bp Feature: domain Description: Arm-DNA-bind_5 Location: 32 58-3555 bp Feature: domain Description: Phage_int_SAM_5 Location: 3609-3912 bp Feature: domain Description: Phage_int_SAM_5 Location: 3609-3912 bp Feature: domain Description: INTN1_C_like Location: 3966-4416 bp Feature: domain Description: INTN1_C_like Location: 3966-4416 bp Feature: gene Location: 4229-4375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348)