myRT

myRT report for GCA_900554835.1_UMGS1762

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Seq: USJD01000001.1 uncultured Prevotella sp. isolate UMGS1762 genome assembly, contig: NODE_9_length_147435_cov_4.927168, whole genome shotgun sequence (147435 bp)
Overview 1 RT 1: 50919-55425 bp Neighborhood of RT #1 [50919, 55425] RVT-UG27 Feature: gene Location: 50919-51857 bp Feature: gene Location: 51871-52341 bp Feature: gene Location: 52877-54136 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 53066-53699 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 53066-53699 bp Feature: gene Location: 54184-54834 bp Feature: gene Location: 54859-55425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: USJD01000089.1 uncultured Prevotella sp. isolate UMGS1762 genome assembly, contig: NODE_928_length_13516_cov_5.274274, whole genome shotgun sequence (13516 bp)
Overview 1 RT 1: 7448-12507 bp Neighborhood of RT #1 [7448, 12587] Glyco_tranf_GTA_type RVT-UG15 GT4_PimA-like Feature: gene Location: 7448-8500 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 7475-8009 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 7475-8009 bp Feature: gene Location: 8493-9254 bp Feature: gene Location: 9306-10868 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 9747-10143 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 9747-10143 bp Feature: gene Location: 11094-11282 bp Feature: gene Location: 11412-12587 bp Feature: domain Description: GT4_PimA-like Location: 11484-12507 bp Feature: domain Description: GT4_PimA-like Location: 11484-12 507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_tranf_GTA_type (cl11394), RVT-UG15, GT4_PimA-like (cd03801)

Seq: USJD01000098.1 uncultured Prevotella sp. isolate UMGS1762 genome assembly, contig: NODE_1023_length_12725_cov_3.955643, whole genome shotgun sequence (12725 bp)
Overview 1 RT 1: 8905-12716 bp Neighborhood of RT #1 [8905, 12724] LpxB RVT-GII GIIM HTH_ARAC Feature: gene Location: 8905-10293 bp Feature: domain Description: LpxB Location: 8908-10039 bp Feature: domain Description: LpxB Location: 8908-1003 9 bp Feature: gene Location: 10542-10718 bp Feature: gene Location: 10895-12232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11096-11714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11096-11714 bp Feature: domain Description: GIIM Note: maturase Location: 11768-11978 bp Feature: domain Description: GIIM Note: maturase Location: 11768-11978 bp Feature: gene Location: 12335-12724 bp Feature: domain Description: HTH_ARAC Location: 12467-12716 bp Feature: domain Description: HTH_ARAC Location: 12467-12716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LpxB (pfam02684), RVT-GII, GIIM (pfam08388), HTH_ARAC (smart00342)

Seq: USJD01000370.1 uncultured Prevotella sp. isolate UMGS1762 genome assembly, contig: NODE_10690_length_2467_cov_3.383499, whole genome shotgun sequence (2467 bp)
Overview 1 RT 1: 87-2334 bp Neighborhood of RT #1 [87, 2334] Methyltransf_11 RVT-GII GIIM Feature: gene Location: 87-698 bp Feature: domain Description: Methyltransf_11 Location: 225-522 bp Feature: domain Description: Methyltransf_11 Location: 225-522 bp Feature: gene Location: 812-2110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1067-1760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1067-1760 bp Feature: domain Description: GIIM Note: maturase Location: 1820-2039 bp Feature: domain Description: GIIM Note: maturase Location: 1820-2039 bp Feature: gene Location: 2161-2334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_11 (pfam08241), RVT-GII, GIIM (pfam08388)