myRT

myRT report for GCA_900555595.1_UMGS1844

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Seq: USLS01000092.1 uncultured Solobacterium sp. isolate UMGS1844 genome assembly, contig: NODE_3095_length_11073_cov_5.920584, whole genome shotgun sequence (11073 bp)
Overview 1 RT 1: 101-3439 bp Neighborhood of RT #1 [101, 3474] RVT_N RVT-GII GIIM GIIM LytT Feature: gene Location: 101-250 bp Feature: gene Location: 717-2183 bp Feature: domain Description: RVT_N Location: 735-978 bp Feature: domain Description: RVT_N Location: 735-978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041-1680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 -1 680 bp Feature: domain Description: GIIM Note: maturase Location: 1731-1965 bp Feature: domain Description: GIIM Note: maturase Location: 1 731 -1 965 bp Feature: gene Location: 2184-2687 bp Feature: domain Description: GIIM Note: maturase Location: 2334-2496 bp Feature: domain Description: GIIM Note: maturase Location: 2334-2496 bp Feature: gene Location: 2758-3474 bp Feature: domain Description: LytT Location: 2761-3439 bp Feature: domain Description: LytT Location: 2761 -3439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LytT (COG3279)

Seq: USLS01000098.1 uncultured Solobacterium sp. isolate UMGS1844 genome assembly, contig: NODE_3323_length_10350_cov_4.548810, whole genome shotgun sequence (10350 bp)
Overview 1 RT 1: 2-2584 bp Neighborhood of RT #1 [2, 2607] RVT-UG10 AE_Prim_S_like MutT_pyrophosphohydrolase Feature: gene Location: 2-964 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 158-776 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 158-776 bp Feature: gene Location: 1103-2122 bp Feature: domain Description: AE_Prim_S_like Location: 1271-1634 bp Feature: domain Description: AE_Prim_S_like Location: 12 71-1634 bp Feature: gene Location: 2194-2607 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 2224-2584 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 2 2 2 4-2 584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10, AE_Prim_S_like (cl01287), MutT_pyrophosphohydrolase (cd03425)

Seq: USLS01000214.1 uncultured Solobacterium sp. isolate UMGS1844 genome assembly, contig: NODE_7759_length_3990_cov_2.418043, whole genome shotgun sequence (3990 bp)
Overview 1 RT 1: 103-3742 bp Neighborhood of RT #1 [103, 3762] Hypoth_Ymh RVT-AbiP2 COG1373 Feature: gene Location: 103-897 bp Feature: domain Description: Hypoth_Ymh Location: 520-874 bp Feature: domain Description: Hypoth_Ymh Location: 520-874 bp Feature: gene Location: 922-2238 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1144-1600 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1144-1600 bp Feature: gene Location: 2247-2444 bp Feature: gene Location: 2503-3762 bp Feature: domain Description: COG1373 Location: 2509-3742 bp Feature: domain Description: COG13 73 Location: 2509-3 742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hypoth_Ymh (pfam09509), RVT-AbiP2, COG1373 (Predicted ATPase, AAA+ superfamily )

Seq: USLS01000341.1 uncultured Solobacterium sp. isolate UMGS1844 genome assembly, contig: NODE_12808_length_2237_cov_11.459670, whole genome shotgun sequence (2237 bp)
Overview 1 RT 1: 1-2235 bp Neighborhood of RT #1 [1, 2235] RVT-AbiK Feature: gene Location: 1-198 bp Feature: gene Location: 296-1840 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 734-1154 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 734 -1154 bp Feature: gene Location: 1906-2235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK