myRT

myRT report for GCA_900555635.1_UMGS1845

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Seq: USLU01000058.1 uncultured Bacteroides sp. isolate UMGS1845 genome assembly, contig: NODE_322_length_32450_cov_7.4247, whole genome shotgun sequence (32450 bp)
Overview 1 RT 1: 1413-7693 bp Neighborhood of RT #1 [1413, 7806] group_II_RT_mat RVT-GII KOG4768 RVT-GII Intron_maturas2 Trehalase PRK10137 SGSH Feature: gene Location: 1413-1601 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1419-1566 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 41 9-1 566 bp Feature: gene Location: 1696-1839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1699-1819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 699-1 81 9 bp Feature: gene Location: 1910-2101 bp Feature: domain Description: KOG4768 Location: 1967-2099 bp Feature: domain Description: KOG4768 Location: 1 967-2099 bp Feature: gene Location: 2141-2689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2147-2213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 47-221 3 bp Feature: domain Description: Intron_maturas2 Location: 2285-2594 bp Feature: domain Description: Intron_maturas2 Location: 2285-2594 bp Feature: gene Location: 3084-5831 bp Feature: domain Description: Trehalase Location: 4521-4611 bp Feature: domain Description: Trehalase Location: 4521 -461 1 bp Feature: domain Description: PRK10137 Location: 4944-5427 bp Feature: domain Description: PRK1 01 37 Location: 4944-5427 bp Feature: gene Location: 6220-7806 bp Feature: domain Description: SGSH Location: 6364-7693 bp Feature: domain Description: SGSH Location: 6364-7693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Intron_maturas2 (pfam01348), Trehalase (pfam01204), PRK10137 (alpha-glucosidase; Provisional), SGSH (cd16027)

Seq: USLU01000076.1 uncultured Bacteroides sp. isolate UMGS1845 genome assembly, contig: NODE_424_length_24762_cov_6.11126, whole genome shotgun sequence (24762 bp)
Overview 1 RT 1: 4349-10857 bp Neighborhood of RT #1 [4349, 10868] Mfa_like_1 RVT-GII RVT-GII GIIM Abhydrolase_7 Feature: gene Location: 4349-6391 bp Feature: domain Description: Mfa_like_1 Location: 4508-5222 bp Feature: domain Description: Mfa_like_1 Location: 4508-52 2 2 bp Feature: gene Location: 6858-7010 bp Feature: gene Location: 7131-7442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7134-7398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7134-7398 bp Feature: gene Location: 8164-8964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8377-8959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8377-8959 bp Feature: gene Location: 9102-9434 bp Feature: domain Description: GIIM Note: maturase Location: 9120-9321 bp Feature: domain Description: GIIM Note: maturase Location: 912 0-932 1 bp Feature: gene Location: 9624-10868 bp Feature: domain Description: Abhydrolase_7 Location: 9705-10857 bp Feature: domain Description: Abhydrolase_7 Location: 9705-10857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mfa_like_1 (pfam13149), RVT-GII, GIIM (pfam08388), Abhydrolase_7 (pfam12715)

Seq: USLU01000080.1 uncultured Bacteroides sp. isolate UMGS1845 genome assembly, contig: NODE_446_length_23889_cov_8.2663, whole genome shotgun sequence (23889 bp)
Overview 1 RT 1: 149-3221 bp Neighborhood of RT #1 [149, 3221] RVT-UG7 Feature: gene Location: 149-1744 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 569-956 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 569-956 bp Feature: gene Location: 1801-2604 bp Feature: gene Location: 2667-3221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: USLU01000097.1 uncultured Bacteroides sp. isolate UMGS1845 genome assembly, contig: NODE_763_length_15244_cov_7.67839, whole genome shotgun sequence (15244 bp)
Overview 1 RT 1: 3-8158 bp Neighborhood of RT #1 [3, 8158] RVT-DGRs Feature: gene Location: 3-2477 bp Feature: gene Location: 2483-5233 bp Feature: gene Location: 5540-6859 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5726-6323 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5726-6323 bp Feature: gene Location: 6884-7093 bp Feature: gene Location: 7106-8158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: USLU01000103.1 uncultured Bacteroides sp. isolate UMGS1845 genome assembly, contig: NODE_891_length_13518_cov_5.2186, whole genome shotgun sequence (13518 bp)
Overview 1 RT 1: 7460-10966 bp Neighborhood of RT #1 [7460, 10966] HU_rel RVT-DGRs Avd_like Feature: gene Location: 7460-7846 bp Feature: gene Location: 8161-8658 bp Feature: domain Description: HU_rel Location: 8191-8527 bp Feature: domain Description: HU_rel Location: 8191-85 27 bp Feature: gene Location: 8824-10089 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9019-9748 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9019-9748 bp Feature: gene Location: 10064-10423 bp Feature: domain Description: Avd_like Location: 10091-10397 bp Feature: domain Description: Avd_like Location: 10091-10397 bp Feature: gene Location: 10436-10966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HU_rel (TIGR01201), RVT-DGRs, Avd_like (cd16376)