myRT

myRT report for GCA_900555835.1_UMGS1864

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Seq: USMK01000006.1 uncultured Clostridium sp. isolate UMGS1864 genome assembly, contig: NODE_72_length_72303_cov_5.036541, whole genome shotgun sequence (72303 bp)
Overview 1 RT 1: 32578-40221 bp Neighborhood of RT #1 [32578, 40748] PilE RVT-DGRs MutS MutS Bro-N Feature: gene Location: 32578-34380 bp Feature: domain Description: PilE Location: 32641-32800 bp Feature: domain Description: PilE Location: 32641 -32800 bp Feature: gene Location: 35218-36951 bp Feature: gene Location: 37172-38278 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37385-37994 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37385-37994 bp Feature: gene Location: 38716-39087 bp Feature: domain Description: MutS Location: 38725-38926 bp Feature: domain Description: MutS Location: 38725-38926 bp Feature: domain Description: MutS Location: 38950-39079 bp Feature: domain Description: MutS Location: 38950-39079 bp Feature: gene Location: 39885-40748 bp Feature: domain Description: Bro-N Location: 39945-40221 bp Feature: domain Description: Bro-N Location: 39945-40221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PilE (COG4968), RVT-DGRs, MutS (COG0249), Bro-N (smart01040)

Seq: USMK01000013.1 uncultured Clostridium sp. isolate UMGS1864 genome assembly, contig: NODE_231_length_40923_cov_4.595405, whole genome shotgun sequence (40923 bp)
Overview 1 RT 1: 8235-13561 bp Neighborhood of RT #1 [8235, 13561] Phage_int_SAM_3 INT_ICEBs1_C_like RVT-UG2 SieB Feature: gene Location: 8235-8426 bp Feature: gene Location: 8605-9798 bp Feature: domain Description: Phage_int_SAM_3 Location: 8800-8962 bp Feature: domain Description: Phage_int_SAM_3 Location: 8800-8962 bp Feature: domain Description: INT_ICEBs1_C_like Location: 9178-9730 bp Feature: domain Description: INT_ICEBs1_C_like Location: 9178-9730 bp Feature: gene Location: 10337-11797 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 10559-11432 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 10559-11432 bp Feature: gene Location: 11815-12348 bp Feature: domain Description: SieB Location: 11875-12289 bp Feature: domain Description: SieB Location: 11875-12 2 89 bp Feature: gene Location: 12359-13561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-UG2, SieB (pfam14163)

Seq: USMK01000018.1 uncultured Clostridium sp. isolate UMGS1864 genome assembly, contig: NODE_366_length_30367_cov_4.939925, whole genome shotgun sequence (30367 bp)
Overview 1 RT 1: 25870-29986 bp Neighborhood of RT #1 [25870, 30225] Cmk PDDEXK_2 RVT-DGRs Avd_like MutS_I Feature: gene Location: 25870-26547 bp Feature: domain Description: Cmk Location: 25873-26545 bp Feature: domain Description: Cmk Location: 25873 -26545 bp Feature: gene Location: 26900-27781 bp Feature: domain Description: PDDEXK_2 Location: 26918-27584 bp Feature: domain Description: PDDEXK_2 Location: 26918-27584 bp Feature: gene Location: 28190-29179 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28400-28988 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28400-28988 bp Feature: gene Location: 29469-29813 bp Feature: domain Description: Avd_like Location: 29493-29805 bp Feature: domain Description: Avd_like Location: 29493 -29805 bp Feature: gene Location: 29794-30225 bp Feature: domain Description: MutS_I Location: 29806-29986 bp Feature: domain Description: MutS_I Location: 29806-29986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cmk (COG0283), PDDEXK_2 (pfam12784), RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624)