myRT

myRT report for GCA_900556305.1_UMGS1927

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Seq: USOT01000002.1 uncultured Prevotella sp. isolate UMGS1927 genome assembly, contig: NODE_2_length_106454_cov_5.73011, whole genome shotgun sequence (106454 bp)
Overview 1 RT 1: 53890-56945 bp Neighborhood of RT #1 [53890, 56945] Avd_like RVT-DGRs Feature: gene Location: 53890-54237 bp Feature: domain Description: Avd_like Location: 53917-54226 bp Feature: domain Description: Avd_like Location: 5391 7-54226 bp Feature: gene Location: 54323-54466 bp Feature: gene Location: 54551-55837 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54740-55433 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54740-55433 bp Feature: gene Location: 55916-56152 bp Feature: gene Location: 56460-56945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: USOT01000128.1 uncultured Prevotella sp. isolate UMGS1927 genome assembly, contig: NODE_359_length_8649_cov_6.61683, whole genome shotgun sequence (8649 bp)
Overview 1 RT 1: 136-4324 bp Neighborhood of RT #1 [136, 4324] RVT-GII GIIM DUF4972 ZnMc_astacin_like Feature: gene Location: 136-555 bp Feature: gene Location: 628-789 bp Feature: gene Location: 1330-2736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1672-2290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1672 -2 2 90 bp Feature: domain Description: GIIM Note: maturase Location: 2344-2554 bp Feature: domain Description: GIIM Note: maturase Location: 2 344-2 554 bp Feature: gene Location: 2920-4005 bp Feature: domain Description: DUF4972 Location: 2923-3118 bp Feature: domain Description: DUF4972 Location: 2 92 3-3118 bp Feature: domain Description: ZnMc_astacin_like Location: 3316-3829 bp Feature: domain Description: ZnMc_astacin_like Location: 3316-382 9 bp Feature: gene Location: 4016-4324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4972 (pfam16342), ZnMc_astacin_like (cd04280)

Seq: USOT01000279.1 uncultured Prevotella sp. isolate UMGS1927 genome assembly, contig: NODE_1491_length_3591_cov_5.86934, whole genome shotgun sequence (3591 bp)
Overview 1 RT 1: 753-3589 bp Neighborhood of RT #1 [753, 3588] DDE_Tnp_IS66 VirE_N RVT-UG28b Feature: gene Location: 753-1031 bp Feature: domain Description: DDE_Tnp_IS66 Location: 762-882 bp Feature: domain Description: DDE_Tnp_IS66 Location: 762-882 bp Feature: gene Location: 1252-2277 bp Feature: domain Description: VirE_N Location: 1435-1810 bp Feature: domain Description: VirE_N Location: 143 5-1810 bp Feature: gene Location: 2434-3588 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 2860-3589 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 2860-3 589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), VirE_N (pfam08800), RVT-UG28b

Seq: USOT01000323.1 uncultured Prevotella sp. isolate UMGS1927 genome assembly, contig: NODE_1944_length_3055_cov_9.81533, whole genome shotgun sequence (3055 bp)
Overview 1 RT 1: 3-3051 bp Neighborhood of RT #1 [3, 3053] gltD gltD COG1373 RVT-GII Feature: gene Location: 3-263 bp Feature: domain Description: gltD Location: 9-147 bp Feature: domain Description: gltD Location: 9-14 7 bp Feature: domain Description: gltD Location: 156-258 bp Feature: domain Description: gltD Location: 156-258 bp Feature: gene Location: 567-1844 bp Feature: domain Description: COG1373 Location: 633-1824 bp Feature: domain Description: COG1373 Location: 633-1824 bp Feature: gene Location: 2568-3053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2910-3051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2910-3051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gltD (PRK12810), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-GII

Seq: USOT01000345.1 uncultured Prevotella sp. isolate UMGS1927 genome assembly, contig: NODE_2207_length_2808_cov_8.8834, whole genome shotgun sequence (2808 bp)
Overview 1 RT 1: 3-2510 bp Neighborhood of RT #1 [3, 2518] RVT-GII GIIM COG1373 Feature: gene Location: 3-974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-5 28 bp Feature: domain Description: GIIM Note: maturase Location: 585-789 bp Feature: domain Description: GIIM Note: maturase Location: 5 85 -789 bp Feature: gene Location: 1316-2518 bp Feature: domain Description: COG1373 Location: 1322-2510 bp Feature: domain Description: COG1373 Location: 1322-25 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG1373 (Predicted ATPase, AAA+ superfamily )