myRT

myRT report for GCA_900556655.1_UMGS1952

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Seq: USPS01000046.1 uncultured Enterococcus sp. isolate UMGS1952 genome assembly, contig: NODE_336_length_7882_cov_8.20468, whole genome shotgun sequence (7882 bp)
Overview 1 RT 1: 36-3347 bp Neighborhood of RT #1 [36, 3349] RVT-GII GIIM RVT-GII lysS Feature: gene Location: 36-962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42-507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42-507 bp Feature: domain Description: GIIM Note: maturase Location: 573-786 bp Feature: domain Description: GIIM Note: maturase Location: 573-786 bp Feature: gene Location: 997-1455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1339-1396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 339-1 396 bp Feature: gene Location: 1535-1837 bp Feature: gene Location: 1856-3349 bp Feature: domain Description: lysS Location: 1886-3347 bp Feature: domain Description: lysS Location: 1 886-3347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), lysS (PRK02983)

Seq: USPS01000084.1 uncultured Enterococcus sp. isolate UMGS1952 genome assembly, contig: NODE_432_length_6491_cov_5.62772, whole genome shotgun sequence (6491 bp)
Overview 1 RT 1: 1-5908 bp Neighborhood of RT #1 [1, 6054] RVT-UG5 DUF1848 Feature: gene Location: 1-2466 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 496-997 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 496-997 bp Feature: gene Location: 2517-4850 bp Feature: gene Location: 5116-6054 bp Feature: domain Description: DUF1848 Location: 5122-5908 bp Feature: domain Description: DUF1848 Location: 512 2 -5908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, DUF1848 (pfam08902)

Seq: USPS01000585.1 uncultured Enterococcus sp. isolate UMGS1952 genome assembly, contig: NODE_1571_length_2434_cov_8.78268, whole genome shotgun sequence (2434 bp)
Overview 1 RT 1: 131-2236 bp Neighborhood of RT #1 [131, 2236] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 131-286 bp Feature: gene Location: 625-786 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 658-754 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 658-754 bp Feature: gene Location: 839-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-143 6 bp Feature: domain Description: GIIM Note: maturase Location: 1496-1715 bp Feature: domain Description: GIIM Note: maturase Location: 1496-1715 bp Feature: gene Location: 2069-2236 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)