myRT

myRT report for GCA_900556685.1_UMGS1962

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Seq: USPZ01000003.1 uncultured Clostridiales bacterium isolate UMGS1962 genome assembly, contig: NODE_383_length_18264_cov_4.916854, whole genome shotgun sequence (18264 bp)
Overview 1 RT 1: 1-8702 bp Neighborhood of RT #1 [1, 8713] DUF1566 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 1-312 bp Feature: gene Location: 375-728 bp Feature: gene Location: 719-2140 bp Feature: domain Description: DUF1566 Location: 791-935 bp Feature: domain Description: DUF1 566 Location: 791 -935 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1124-1865 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 24-1 865 bp Feature: gene Location: 2153-2554 bp Feature: domain Description: Avd_like Location: 2192-2531 bp Feature: domain Description: Avd_like Location: 21 92-2531 bp Feature: gene Location: 2684-8713 bp Feature: domain Description: DUF1566 Location: 8399-8702 bp Feature: domain Description: DUF1 566 Location: 8399-8702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)

Seq: USPZ01000005.1 uncultured Clostridiales bacterium isolate UMGS1962 genome assembly, contig: NODE_403_length_17570_cov_5.499857, whole genome shotgun sequence (17570 bp)
Overview 1 RT 1: 10823-15509 bp Neighborhood of RT #1 [10823, 15509] RVT-UG27 Feature: gene Location: 10823-11812 bp Feature: gene Location: 11847-12305 bp Feature: gene Location: 13329-14597 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 13518-14154 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 13518-14154 bp Feature: gene Location: 14594-14824 bp Feature: gene Location: 14907-15509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: USPZ01000172.1 uncultured Clostridiales bacterium isolate UMGS1962 genome assembly, contig: NODE_2132_length_5908_cov_8.508115, whole genome shotgun sequence (5908 bp)
Overview 1 RT 1: 297-5906 bp Neighborhood of RT #1 [297, 5906] DUF262 RVT-UG28b VirE_N Feature: gene Location: 297-1994 bp Feature: domain Description: DUF262 Location: 354-987 bp Feature: domain Description: DUF262 Location: 3 54-987 bp Feature: gene Location: 1997-2797 bp Feature: gene Location: 2801-4576 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 3227-3980 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 3 227-3 980 bp Feature: gene Location: 4692-5711 bp Feature: domain Description: VirE_N Location: 4884-5256 bp Feature: domain Description: VirE_N Location: 4884-5256 bp Feature: gene Location: 5742-5906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), RVT-UG28b, VirE_N (pfam08800)

Seq: USPZ01000672.1 uncultured Clostridiales bacterium isolate UMGS1962 genome assembly, contig: NODE_6689_length_2543_cov_4.602090, whole genome shotgun sequence (2543 bp)
Overview 1 RT 1: 60-2379 bp Neighborhood of RT #1 [60, 2402] RVT-AbiP2 Hypoth_Ymh Feature: gene Location: 60-1583 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 489-945 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4 89-94 5 bp Feature: gene Location: 1608-2402 bp Feature: domain Description: Hypoth_Ymh Location: 2025-2379 bp Feature: domain Description: Hypoth_Ymh Location: 2025-2379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, Hypoth_Ymh (pfam09509)