myRT

myRT report for GCA_900556915.1_UMGS1984

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Seq: USQM01000019.1 uncultured Solobacterium sp. isolate UMGS1984 genome assembly, contig: NODE_2450_length_12157_cov_3.941910, whole genome shotgun sequence (12157 bp)
Overview 1 RT 1: 3550-9437 bp Neighborhood of RT #1 [3550, 9448] MmsB YcjU DUF2974 RVT-GII DUF4230 YjbM Feature: gene Location: 3550-5049 bp Feature: domain Description: MmsB Location: 3559-4387 bp Feature: domain Description: MmsB Location: 3559-4387 bp Feature: domain Description: YcjU Location: 4399-5008 bp Feature: domain Description: YcjU Location: 4399-5008 bp Feature: gene Location: 5051-6250 bp Feature: domain Description: DUF2974 Location: 5384-6056 bp Feature: domain Description: DUF2974 Location: 5384-6056 bp Feature: gene Location: 6320-7594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6578-7241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6578-7241 bp Feature: gene Location: 8154-8801 bp Feature: domain Description: DUF4230 Location: 8337-8751 bp Feature: domain Description: DUF4230 Location: 8337-8751 bp Feature: gene Location: 8804-9448 bp Feature: domain Description: YjbM Location: 8843-9437 bp Feature: domain Description: YjbM Location: 8843-9437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MmsB (COG2084), YcjU (COG0637), DUF2974 (pfam11187), RVT-GII, DUF4230 (pfam14014), YjbM (COG2357)

Seq: USQM01000180.1 uncultured Solobacterium sp. isolate UMGS1984 genome assembly, contig: NODE_10290_length_3670_cov_2.164315, whole genome shotgun sequence (3670 bp)
Overview 1 RT 1: 34-3658 bp Neighborhood of RT #1 [34, 3669] RVT-GII GIIM YloV Asp23 Feature: gene Location: 34-1314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 50-865 bp Feature: domain Description: GIIM Note: maturase Location: 928-1141 bp Feature: domain Description: GIIM Note: maturase Location: 92 8-1141 bp Feature: gene Location: 1876-3507 bp Feature: domain Description: YloV Location: 1909-3505 bp Feature: domain Description: YloV Location: 1909-3505 bp Feature: gene Location: 3523-3669 bp Feature: domain Description: Asp23 Location: 3529-3658 bp Feature: domain Description: Asp2 3 Location: 352 9-3658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YloV (TIGR03599), RVT-GII, GIIM (pfam08388)