myRT

myRT report for GCA_900556975.1_UMGS1994

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Seq: USQZ01000021.1 uncultured Clostridium sp. isolate UMGS1994 genome assembly, contig: NODE_454_length_28750_cov_9.103886, whole genome shotgun sequence (28750 bp)
Overview 1 RT 1: 12029-18824 bp Neighborhood of RT #1 [12029, 18824] RVT-UG2 hsdM Feature: gene Location: 12029-12514 bp Feature: gene Location: 12498-14534 bp Feature: gene Location: 15020-16315 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 15203-16019 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 5203-1 601 9 bp Feature: gene Location: 16439-18007 bp Feature: domain Description: hsdM Location: 16463-17960 bp Feature: domain Description: hsdM Location: 1 6463-1 7960 bp Feature: gene Location: 17997-18824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, hsdM (TIGR00497)

Seq: USQZ01000039.1 uncultured Clostridium sp. isolate UMGS1994 genome assembly, contig: NODE_1023_length_16763_cov_9.769392, whole genome shotgun sequence (16763 bp)
Overview 1 RT 1: 2-12363 bp Neighborhood of RT #1 [2, 12488] SpaA SpaA SpaA SpaA MucBP MucBP MucBP MucBP MucBP MucBP MucBP MucBP RVT-DGRs Avd_like MutS_I Feature: gene Location: 2-10192 bp Feature: domain Description: SpaA Location: 2882-3074 bp Feature: domain Description: SpaA Location: 2 882 -3074 bp Feature: domain Description: SpaA Location: 3224-3419 bp Feature: domain Description: SpaA Location: 32 2 4-3419 bp Feature: domain Description: SpaA Location: 3575-3794 bp Feature: domain Description: SpaA Location: 3575-3794 bp Feature: domain Description: SpaA Location: 3920-4559 bp Feature: domain Description: SpaA Location: 392 0-4559 bp Feature: domain Description: MucBP Location: 6278-6497 bp Feature: domain Description: MucBP Location: 62 78-6497 bp Feature: domain Description: MucBP Location: 6518-6725 bp Feature: domain Description: MucBP Location: 6518-672 5 bp Feature: domain Description: MucBP Location: 7082-7280 bp Feature: domain Description: MucBP Location: 7082 -72 80 bp Feature: domain Description: MucBP Location: 7298-7490 bp Feature: domain Description: MucBP Location: 72 98-7490 bp Feature: domain Description: MucBP Location: 7508-7700 bp Feature: domain Description: MucBP Location: 7508-7700 bp Feature: domain Description: MucBP Location: 7721-7913 bp Feature: domain Description: MucBP Location: 772 1-7913 bp Feature: domain Description: MucBP Location: 7943-8123 bp Feature: domain Description: MucBP Location: 7943-812 3 bp Feature: domain Description: MucBP Location: 8357-8546 bp Feature: domain Description: MucBP Location: 8357-8546 bp Feature: gene Location: 10413-10670 bp Feature: gene Location: 10663-11685 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10876-11482 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10876-11482 bp Feature: gene Location: 11657-12031 bp Feature: domain Description: Avd_like Location: 11693-12002 bp Feature: domain Description: Avd_like Location: 11693-12 002 bp Feature: gene Location: 12021-12488 bp Feature: domain Description: MutS_I Location: 12123-12363 bp Feature: domain Description: MutS_I Location: 12 12 3-12 363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpaA (pfam17802), MucBP (pfam06458), RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624)