myRT

myRT report for GCA_900566005.1_LAUMK15

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Seq: UPHK01000040.1 Mycobacterium persicum strain MK15 genome assembly, contig: LAUMK15_40, whole genome shotgun sequence (30579 bp)
Overview 1 RT 1: 22352-30088 bp Neighborhood of RT #1 [22352, 30088] PRK03381 SSL2 RVT-GII GIIM Germane Gmad2 Feature: gene Location: 22352-24799 bp Feature: domain Description: PRK03381 Location: 22382-24743 bp Feature: domain Description: PRK03381 Location: 22382-24743 bp Feature: gene Location: 24813-26534 bp Feature: domain Description: SSL2 Location: 24852-26232 bp Feature: domain Description: SSL2 Location: 24852-26232 bp Feature: gene Location: 27432-28763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27741-28365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27741 -28365 bp Feature: domain Description: GIIM Note: maturase Location: 28458-28671 bp Feature: domain Description: GIIM Note: maturase Location: 28458-28671 bp Feature: gene Location: 28981-29823 bp Feature: domain Description: Germane Location: 29140-29482 bp Feature: domain Description: Germane Location: 291 40-29482 bp Feature: domain Description: Gmad2 Location: 29533-29788 bp Feature: domain Description: Gmad2 Location: 29533-29788 bp Feature: gene Location: 29927-30088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03381 (PII uridylyl-transferase; Provisional), SSL2 (COG1061), RVT-GII, GIIM (pfam08388), Germane (smart00909), Gmad2 (pfam10648)

Seq: UPHK01000070.1 Mycobacterium persicum strain MK15 genome assembly, contig: LAUMK15_70, whole genome shotgun sequence (57252 bp)
Overview 1 RT 1: 4903-7134 bp Neighborhood of RT #1 [4903, 7235] HTH_32 RVT-GII rve_2 Feature: gene Location: 4903-5340 bp Feature: domain Description: HTH_32 Location: 4930-5155 bp Feature: domain Description: HTH_32 Location: 4930-5155 bp Feature: gene Location: 5476-5748 bp Feature: gene Location: 5885-6313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6203-6287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 03-62 87 bp Feature: gene Location: 6471-6821 bp Feature: gene Location: 7011-7235 bp Feature: domain Description: rve_2 Location: 7026-7134 bp Feature: domain Description: rve_2 Location: 702 6-7134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), RVT-GII, rve_2 (pfam13333)

Seq: UPHK01000158.1 Mycobacterium persicum strain MK15 genome assembly, contig: LAUMK15_158, whole genome shotgun sequence (3139 bp)
Overview 1 RT 1: 3-2397 bp Neighborhood of RT #1 [3, 2397] PRK06526 RVT-GII GIIM Feature: gene Location: 3-581 bp Feature: domain Description: PRK06526 Location: 132-570 bp Feature: domain Description: PRK06526 Location: 13 2-570 bp Feature: gene Location: 726-1067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-870 bp Feature: domain Description: GIIM Note: maturase Location: 939-1050 bp Feature: domain Description: GIIM Note: maturase Location: 93 9-1050 bp Feature: gene Location: 1587-2111 bp Feature: gene Location: 2260-2397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: UPHK01000081.1 Mycobacterium persicum strain MK15 genome assembly, contig: LAUMK15_81, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 594-1782 bp Neighborhood of RT #1 [594, 1856] RVT-GII GIIM Feature: gene Location: 594-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-14 70 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1782 bp Feature: domain Description: GIIM Note: maturase Location: 1554 -1782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)