myRT

myRT report for GCA_900566015.1_LAUMK42

Download annotations/find similar RTs

Seq: UPHL01000044.1 Mycobacterium persicum strain MK42 genome assembly, contig: LAUMK42_44, whole genome shotgun sequence (30062 bp)
Overview 1 RT 1: 22357-29792 bp Neighborhood of RT #1 [22357, 29827] PRK03381 SSL2 RVT-GII GIIM Germane Gmad2 Feature: gene Location: 22357-24804 bp Feature: domain Description: PRK03381 Location: 22387-24748 bp Feature: domain Description: PRK03381 Location: 22387-24748 bp Feature: gene Location: 24818-26539 bp Feature: domain Description: SSL2 Location: 24857-26237 bp Feature: domain Description: SSL2 Location: 24857-26237 bp Feature: gene Location: 27394-28767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27745-28369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27745-28369 bp Feature: domain Description: GIIM Note: maturase Location: 28462-28675 bp Feature: domain Description: GIIM Note: maturase Location: 28462-28675 bp Feature: gene Location: 28985-29827 bp Feature: domain Description: Germane Location: 29144-29486 bp Feature: domain Description: Germane Location: 291 44-29486 bp Feature: domain Description: Gmad2 Location: 29537-29792 bp Feature: domain Description: Gmad2 Location: 29537-29792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03381 (PII uridylyl-transferase; Provisional), SSL2 (COG1061), RVT-GII, GIIM (pfam08388), Germane (smart00909), Gmad2 (pfam10648)

Seq: UPHL01000081.1 Mycobacterium persicum strain MK42 genome assembly, contig: LAUMK42_81, whole genome shotgun sequence (1728 bp)
Overview 1 RT 1: 88-1151 bp Neighborhood of RT #1 [88, 1351] GIIM RVT-GII Feature: gene Location: 88-399 bp Feature: domain Description: GIIM Note: maturase Location: 97-325 bp Feature: domain Description: GIIM Note: maturase Location: 97-32 5 bp Feature: gene Location: 332-1351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 548-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 548-1151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)