myRT

myRT report for GCA_900566035.1_LAUMK4

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Seq: UPHM01000159.1 Mycobacterium persicum strain MK4 genome assembly, contig: LAUMK4_159, whole genome shotgun sequence (3139 bp)
Overview 1 RT 1: 3-2397 bp Neighborhood of RT #1 [3, 2397] PRK06526 RVT-GII GIIM Feature: gene Location: 3-581 bp Feature: domain Description: PRK06526 Location: 132-570 bp Feature: domain Description: PRK06526 Location: 1 32-570 bp Feature: gene Location: 726-1067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-870 bp Feature: domain Description: GIIM Note: maturase Location: 939-1050 bp Feature: domain Description: GIIM Note: maturase Location: 939-1 050 bp Feature: gene Location: 1587-2111 bp Feature: gene Location: 2260-2397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: UPHM01000152.1 Mycobacterium persicum strain MK4 genome assembly, contig: LAUMK4_152, whole genome shotgun sequence (31664 bp)
Overview 1 RT 1: 11624-17226 bp Neighborhood of RT #1 [11624, 17321] HTH_XRE RVT-GII GIIM RVT_N RVT-GII GIIM RVT-GII pknD Feature: gene Location: 11624-12127 bp Feature: gene Location: 12144-12488 bp Feature: domain Description: HTH_XRE Location: 12195-12354 bp Feature: domain Description: HTH_XRE Location: 12 195-12 354 bp Feature: gene Location: 12599-13336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12695-12914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 695-12 914 bp Feature: domain Description: GIIM Note: maturase Location: 13031-13235 bp Feature: domain Description: GIIM Note: maturase Location: 13031-132 35 bp Feature: gene Location: 13337-15103 bp Feature: domain Description: RVT_N Location: 13421-13658 bp Feature: domain Description: RVT_N Location: 1342 1-13658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13718-14375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13718-14375 bp Feature: domain Description: GIIM Note: maturase Location: 14429-14663 bp Feature: domain Description: GIIM Note: maturase Location: 1442 9-14663 bp Feature: gene Location: 15680-16747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16301-16679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16301-16679 bp Feature: gene Location: 16813-16956 bp Feature: gene Location: 17124-17321 bp Feature: domain Description: pknD Location: 17157-17226 bp Feature: domain Description: pknD Location: 17157-172 2 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), pknD (PRK13184)

Seq: UPHM01000030.1 Mycobacterium persicum strain MK4 genome assembly, contig: LAUMK4_30, whole genome shotgun sequence (16216 bp)
Overview 1 RT 1: 7977-15713 bp Neighborhood of RT #1 [7977, 15713] PRK03381 SSL2 RVT-GII GIIM Germane Gmad2 Feature: gene Location: 7977-10424 bp Feature: domain Description: PRK03381 Location: 8007-10368 bp Feature: domain Description: PRK03 3 81 Location: 8007-103 68 bp Feature: gene Location: 10438-12159 bp Feature: domain Description: SSL2 Location: 10477-11857 bp Feature: domain Description: SSL2 Location: 10477-11857 bp Feature: gene Location: 13057-14388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13366-13990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 3 66-13 990 bp Feature: domain Description: GIIM Note: maturase Location: 14083-14296 bp Feature: domain Description: GIIM Note: maturase Location: 14083 -14296 bp Feature: gene Location: 14720-15448 bp Feature: domain Description: Germane Location: 14765-15107 bp Feature: domain Description: Germane Location: 14765-15107 bp Feature: domain Description: Gmad2 Location: 15158-15413 bp Feature: domain Description: Gmad2 Location: 15158-15413 bp Feature: gene Location: 15552-15713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03381 (PII uridylyl-transferase; Provisional), SSL2 (COG1061), RVT-GII, GIIM (pfam08388), Germane (smart00909), Gmad2 (pfam10648)

Seq: UPHM01000066.1 Mycobacterium persicum strain MK4 genome assembly, contig: LAUMK4_66, whole genome shotgun sequence (57252 bp)
Overview 1 RT 1: 4903-7134 bp Neighborhood of RT #1 [4903, 7235] HTH_32 RVT-GII rve_2 Feature: gene Location: 4903-5340 bp Feature: domain Description: HTH_32 Location: 4930-5155 bp Feature: domain Description: HTH_32 Location: 4 930-5155 bp Feature: gene Location: 5476-5748 bp Feature: gene Location: 5885-6313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6203-6287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6203-6287 bp Feature: gene Location: 6471-6821 bp Feature: gene Location: 7011-7235 bp Feature: domain Description: rve_2 Location: 7026-7134 bp Feature: domain Description: rve_2 Location: 7026-7134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), RVT-GII, rve_2 (pfam13333)

Seq: UPHM01000080.1 Mycobacterium persicum strain MK4 genome assembly, contig: LAUMK4_80, whole genome shotgun sequence (1943 bp)
Overview 1 RT 1: 594-1782 bp Neighborhood of RT #1 [594, 1856] RVT-GII GIIM Feature: gene Location: 594-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1470 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1782 bp Feature: domain Description: GIIM Note: maturase Location: 15 5 4-1782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)