myRT

myRT report for GCA_900573985.1_CAM

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Seq: UWOK01000002.1 Campylobacter showae genome assembly, contig: LBEDAOFL_2, whole genome shotgun sequence (299757 bp)
Overview 1 RT 1: 55263-60528 bp 2 RT 2: 99814-106169 bp Neighborhood of RT #1 [55263, 60528] COG3177 cas1 RVT-CRISPR Cas1_I-II-III CRISPR_Cas6 Neighborhood of RT #2 [99814, 106169] Cas6_III CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Feature: gene Location: 55263-56039 bp Feature: domain Description: COG3177 Location: 55284-55977 bp Feature: domain Description: COG31 77 Location: 55284-55977 bp Feature: gene Location: 57254-57682 bp Feature: domain Description: cas1 Location: 57263-57662 bp Feature: domain Description: cas1 Location: 57263-57662 bp Feature: gene Location: 57702-59450 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 57897-58503 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 57897-58503 bp Feature: domain Description: Cas1_I-II-III Location: 58938-59412 bp Feature: domain Description: Cas1 _I-II-III Location: 58938-5941 2 bp Feature: gene Location: 59492-60142 bp Feature: domain Description: CRISPR_Cas6 Location: 59795-60125 bp Feature: domain Description: CRISPR_Cas6 Location: 59795-601 25 bp Feature: gene Location: 60217-60528 bp Feature: gene Location: 99814-100644 bp Feature: domain Description: Cas6_III Location: 99835-100000 bp Feature: domain Description: Cas6_III Location: 99835-1 00000 bp Feature: domain Description: CRISPR_Cas6 Location: 100279-100621 bp Feature: domain Description: CRISPR_Cas6 Location: 1 00279-1 00621 bp Feature: gene Location: 100625-100858 bp Feature: gene Location: 101450-103684 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 101651-102260 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 01 651 -1 02260 bp Feature: domain Description: Cas1_I-II-III Location: 102725-103646 bp Feature: domain Description: Cas1 _I-II-III Location: 1 02725-1 03646 bp Feature: gene Location: 105310-105459 bp Feature: gene Location: 105873-106169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), cas1 (TIGR00287), RVT-CRISPR, Cas1_I-II-III (cl00656), CRISPR_Cas6 (pfam10040), Cas6_III (cd09760)