myRT

myRT report for GCA_900580685.1_p11.D6

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Seq: UTBI01000236.1 Pseudomonas sp. 286 isolate p11.D6 genome assembly, contig: 236, whole genome shotgun sequence (41602 bp)
Overview 1 RT 1: 7714-15384 bp Neighborhood of RT #1 [7714, 15401] DUF1837 BRR2 BRR2 RVT-UG5 COG3905 ParE Feature: gene Location: 7714-8679 bp Feature: domain Description: DUF1837 Location: 7846-8569 bp Feature: domain Description: DUF1 837 Location: 7846-8569 bp Feature: gene Location: 8649-10766 bp Feature: domain Description: BRR2 Location: 8901-9285 bp Feature: domain Description: BRR2 Location: 8901 -9285 bp Feature: domain Description: BRR2 Location: 9555-10125 bp Feature: domain Description: BRR2 Location: 9555-1 01 25 bp Feature: gene Location: 10982-14218 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 11510-11993 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 51 0-1 1 993 bp Feature: gene Location: 14885-15148 bp Feature: domain Description: COG3905 Location: 14900-15107 bp Feature: domain Description: COG3905 Location: 1 4900-1 51 07 bp Feature: gene Location: 15111-15401 bp Feature: domain Description: ParE Location: 15114-15384 bp Feature: domain Description: ParE Location: 1 51 1 4-1 5384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), BRR2 (COG1204), RVT-UG5, COG3905 (Predicted transcriptional regulator ), ParE (COG3668)

Seq: UTBI01000020.1 Pseudomonas sp. 286 isolate p11.D6 genome assembly, contig: 20, whole genome shotgun sequence (14546 bp)
Overview 1 RT 1: 9801-14544 bp Neighborhood of RT #1 [9801, 14544] HEPN_MAE_28990 RVT-Retrons Feature: gene Location: 9801-10772 bp Feature: domain Description: HEPN_MAE_28990 Location: 9945-10194 bp Feature: domain Description: HEPN_MAE_2 8990 Location: 9945-10194 bp Feature: gene Location: 11051-12244 bp Feature: gene Location: 12271-13446 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12547-13174 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 547-13174 bp Feature: gene Location: 13633-14544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_MAE_28990 (pfam18737), RVT-Retrons

Seq: UTBI01000169.1 Pseudomonas sp. 286 isolate p11.D6 genome assembly, contig: 169, whole genome shotgun sequence (2501 bp)
Overview 1 RT 1: 53-2225 bp Neighborhood of RT #1 [53, 2225] RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 53-1360 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 317-902 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 3 17-902 bp Feature: gene Location: 1465-1647 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 1495-1600 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 1495-1600 bp Feature: gene Location: 1764-2225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4, CxxC_CXXC_SSSS (smart00834)