myRT

myRT report for GCA_900580815.1_p11.F3

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Seq: UTBT01000013.1 Pseudomonas sp. 286 isolate p11.F3 genome assembly, contig: 13, whole genome shotgun sequence (7662 bp)
Overview 1 RT 1: 2921-7092 bp Neighborhood of RT #1 [2921, 7169] TnpB_IS66 RVT-GII GIIM HEPN_Apea PRK09862 Feature: gene Location: 2921-3280 bp Feature: domain Description: TnpB_IS66 Location: 2951-3245 bp Feature: domain Description: TnpB_IS66 Location: 2951 -3245 bp Feature: gene Location: 3419-3682 bp Feature: gene Location: 3669-5219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4131-4821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 31 -4821 bp Feature: domain Description: GIIM Note: maturase Location: 4881-5109 bp Feature: domain Description: GIIM Note: maturase Location: 4881 -51 09 bp Feature: gene Location: 5494-6795 bp Feature: domain Description: HEPN_Apea Location: 6424-6676 bp Feature: domain Description: HEPN_Apea Location: 6424-6676 bp Feature: gene Location: 6888-7169 bp Feature: domain Description: PRK09862 Location: 6891-7092 bp Feature: domain Description: PRK09862 Location: 6891 -7092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388), HEPN_Apea (pfam18739), PRK09862 (ATP-dependent protease)