myRT

myRT report for GCA_900581065.1_p12.A10

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Seq: UTCT01000057.1 Pseudomonas sp. 286 isolate p12.A10 genome assembly, contig: 57, whole genome shotgun sequence (206342 bp)
Overview 1 RT 1: 54403-58614 bp Neighborhood of RT #1 [54403, 58646] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 RVT-GII GIIM TnpB_IS66 DUF4263 Feature: gene Location: 54403-55914 bp Feature: domain Description: LZ_Tnp_IS66 Location: 54490-54700 bp Feature: domain Description: LZ_Tnp_IS66 Location: 54490-54700 bp Feature: domain Description: zf-IS66 Location: 54730-54853 bp Feature: domain Description: zf-IS66 Location: 54730-54853 bp Feature: domain Description: DDE_Tnp_IS66 Location: 54898-55753 bp Feature: domain Description: DDE_Tnp_IS66 Location: 54898-55753 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 55774-55888 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 55774-55888 bp Feature: gene Location: 55933-56136 bp Feature: domain Description: TnpB_IS66 Location: 55957-56101 bp Feature: domain Description: TnpB_IS66 Location: 55957-561 01 bp Feature: gene Location: 56170-57438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56374-57031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56374-57031 bp Feature: domain Description: GIIM Note: maturase Location: 57109-57331 bp Feature: domain Description: GIIM Note: maturase Location: 571 09-57331 bp Feature: gene Location: 57845-58153 bp Feature: domain Description: TnpB_IS66 Location: 57875-58028 bp Feature: domain Description: TnpB_IS66 Location: 57875-58028 bp Feature: gene Location: 58152-58646 bp Feature: domain Description: DUF4263 Location: 58275-58614 bp Feature: domain Description: DUF4263 Location: 58275-5861 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388), DUF4263 (pfam14082)