myRT

myRT report for GCA_900581115.1_p11.H9

Download annotations/find similar RTs

Seq: UTCX01000025.1 Pseudomonas sp. 286 isolate p11.H9 genome assembly, contig: 25, whole genome shotgun sequence (705520 bp)
Overview 1 RT 1: 563023-571075 bp Neighborhood of RT #1 [563023, 572157] chaperone_ClpB Adaptin_N RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C NACHT Feature: gene Location: 563023-564396 bp Feature: gene Location: 564426-569225 bp Feature: domain Description: chaperone_ClpB Location: 565179-565395 bp Feature: domain Description: chaperone_ClpB Location: 5651 79-565395 bp Feature: domain Description: Adaptin_N Location: 568059-568431 bp Feature: domain Description: Adaptin_N Location: 568059-568431 bp Feature: gene Location: 569560-569913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 569701-569842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 569701 -569842 bp Feature: gene Location: 569950-570297 bp Feature: domain Description: DDE_Tnp_IS66 Location: 569977-570136 bp Feature: domain Description: DDE_Tnp_IS66 Location: 569977-5701 36 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 570160-570271 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5701 60-570271 bp Feature: gene Location: 570349-572157 bp Feature: domain Description: NACHT Location: 570640-571075 bp Feature: domain Description: NACHT Location: 570640-571 075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT chaperone_ClpB (TIGR03346), Adaptin_N (pfam01602), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), NACHT (pfam05729)